Analysis of interatomic Contacts of Structural Units in PDB entry:
7R9I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R9I entry

There is 1 chain in PDB entry 7R9I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
J
 ARG 18ARG 522
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7R9I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
J
20 35Right-handed alpha
Helix 2
AA2
J
60 67Right-handed alpha
Helix 3
AA3
J
73 89Right-handed alpha
Helix 4
AA4
J
92 112Right-handed alpha
Helix 5
AA5
J
116 135Right-handed alpha
Helix 6
AA6
J
136 138Right-handed 310
Helix 7
AA7
J
149 160Right-handed alpha
Helix 8
AA8
J
168 180Right-handed alpha
Helix 9
AA9
J
202 206Right-handed 310
Helix 10
AB1
J
254 258Right-handed 310
Helix 11
AB2
J
261 280Right-handed alpha
Helix 12
AB3
J
293 302Right-handed alpha
Helix 13
AB4
J
313 322Right-handed alpha
Helix 14
AB5
J
373 398Right-handed alpha
Helix 15
AB6
J
405 422Right-handed alpha
Helix 16
AB7
J
426 436Right-handed alpha
Helix 17
AB8
J
438 449Right-handed alpha
Helix 18
AB9
J
451 456Right-handed alpha
Helix 19
AC1
J
457 463Right-handed alpha
Helix 20
AC2
J
482 487Right-handed alpha
Helix 21
AC3
J
492 506Right-handed alpha
Helix 22
AC4
J
506 511Right-handed alpha
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There are 4 sheets in PDB entry 7R9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
140 141first strand
Strand 2
J
399 402anti-parallel
Strand 3
J
489 491anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
196 199first strand
Strand 2
J
366 371parallel
Strand 3
J
207 209anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
212 214first strand
Strand 2
J
353 357anti-parallel
Strand 3
J
342 346anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
234 235first strand
Strand 2
J
285 286parallel
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