Analysis of interatomic Contacts of Structural Units in PDB entry:
7R9X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R9X entry

There are 2 chains in PDB entry 7R9X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1353ASP 1775
B
 PRO 1354ASP 1775
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7R9X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1364 1377Right-handed alpha
Helix 2
AA2
A
1396 1411Right-handed alpha
Helix 3
AA3
A
1412 1414Right-handed 310
Helix 4
AA4
A
1432 1436Right-handed 310
Helix 5
AA5
A
1449 1466Right-handed alpha
Helix 6
AA6
A
1501 1522Right-handed alpha
Helix 7
AA7
A
1534 1547Right-handed alpha
Helix 8
AA8
A
1548 1560Right-handed alpha
Helix 9
AA9
A
1588 1601Right-handed alpha
Helix 10
AB1
A
1603 1621Right-handed alpha
Helix 11
AB2
A
1639 1643Right-handed 310
Helix 12
AB3
A
1660 1676Right-handed alpha
Helix 13
AB4
A
1677 1679Right-handed 310
Helix 14
AB5
A
1682 1690Right-handed alpha
Helix 15
AB6
A
1754 1774Right-handed alpha
Helix 16
AB7
B
1364 1377Right-handed alpha
Helix 17
AB8
B
1396 1411Right-handed alpha
Helix 18
AB9
B
1412 1414Right-handed 310
Helix 19
AC1
B
1432 1436Right-handed 310
Helix 20
AC2
B
1449 1466Right-handed alpha
Helix 21
AC3
B
1501 1521Right-handed alpha
Helix 22
AC4
B
1534 1547Right-handed alpha
Helix 23
AC5
B
1548 1560Right-handed alpha
Helix 24
AC6
B
1588 1601Right-handed alpha
Helix 25
AC7
B
1603 1620Right-handed alpha
Helix 26
AC8
B
1639 1643Right-handed 310
Helix 27
AC9
B
1660 1676Right-handed alpha
Helix 28
AD1
B
1677 1679Right-handed 310
Helix 29
AD2
B
1682 1690Right-handed alpha
Helix 30
AD3
B
1758 1774Right-handed alpha
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There are 6 sheets in PDB entry 7R9X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1359 1362first strand
Strand 2
A
1427 1430anti-parallel
Strand 3
A
1416 1419anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1442 1444first strand
Strand 2
A
1477 1485parallel
Strand 3
A
1488 1496anti-parallel
Strand 4
A
1384 1392anti-parallel
Strand 5
A
1715 1722anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1578 1582first strand
Strand 2
A
1741 1749anti-parallel
Strand 3
A
1731 1738anti-parallel
Strand 4
A
1697 1702parallel
Strand 5
A
1624 1632parallel
Strand 6
A
1648 1656anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1359 1362first strand
Strand 2
B
1427 1430anti-parallel
Strand 3
B
1416 1419anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1442 1444first strand
Strand 2
B
1477 1485parallel
Strand 3
B
1488 1496anti-parallel
Strand 4
B
1384 1392anti-parallel
Strand 5
B
1715 1722anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1579 1582first strand
Strand 2
B
1741 1748anti-parallel
Strand 3
B
1731 1738anti-parallel
Strand 4
B
1697 1703parallel
Strand 5
B
1624 1632parallel
Strand 6
B
1648 1656anti-parallel
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