Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 7RAP entry
There are 9 chains in PDB entry 7RAP
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
GLY 1 | LEU 2 |
A
|
ARG 4 | LYS 5 |
A
|
LEU 7 | ALA 9 |
A
|
ALA 11 | LYS 12 |
A
|
LYS 14 | LYS 14 |
A
|
CYS 17 | CYS 17 |
A
|
ALA 20 | ALA 20 |
A
|
LYS 22 | LEU 23 |
A
|
CYS 25 | CYS 27 |
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There is 1
helix in PDB entry 7RAP. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 2 |
13 | Right-handed alpha |
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There are no sheets in PDB entry
7RAP
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il