Analysis of interatomic Contacts of Structural Units in PDB entry:
7RB2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RB2 entry

There are 4 chains in PDB entry 7RB2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA -1	LEU 345
B	ALA -1	LEU 345
C	ALA -1	LEU 345
D	ALA -1	TYR 230

There are 62 helices in PDB entry 7RB2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	13	Right-handed alpha
Helix 2	AA2	A	50	60	Right-handed alpha
Helix 3	AA3	A	68	75	Right-handed alpha
Helix 4	AA4	A	113	117	Right-handed 310
Helix 5	AA5	A	129	137	Right-handed alpha
Helix 6	AA6	A	207	216	Right-handed alpha
Helix 7	AA7	A	217	225	Right-handed alpha
Helix 8	AA8	A	231	236	Right-handed alpha
Helix 9	AA9	A	250	261	Right-handed alpha
Helix 10	AB1	A	298	308	Right-handed alpha
Helix 11	AB2	B	2	13	Right-handed alpha
Helix 12	AB3	B	50	60	Right-handed alpha
Helix 13	AB4	B	68	75	Right-handed alpha
Helix 14	AB5	B	113	117	Right-handed 310
Helix 15	AB6	B	129	137	Right-handed alpha
Helix 16	AB7	B	207	216	Right-handed alpha
Helix 17	AB8	B	217	226	Right-handed alpha
Helix 18	AB9	B	227	230	Right-handed 310
Helix 19	AC1	B	231	236	Right-handed alpha
Helix 20	AC2	B	250	261	Right-handed alpha
Helix 21	AC3	B	298	308	Right-handed alpha
Helix 22	AC4	C	2	13	Right-handed alpha
Helix 23	AC5	C	50	60	Right-handed alpha
Helix 24	AC6	C	68	75	Right-handed alpha
Helix 25	AC7	C	113	117	Right-handed 310
Helix 26	AC8	C	129	137	Right-handed alpha
Helix 27	AC9	C	207	216	Right-handed alpha
Helix 28	AD1	C	217	225	Right-handed alpha
Helix 29	AD2	C	227	230	Right-handed 310
Helix 30	AD3	C	231	236	Right-handed alpha
Helix 31	AD4	C	250	261	Right-handed alpha
Helix 32	AD5	C	298	308	Right-handed alpha
Helix 33	AD6	D	2	13	Right-handed alpha
Helix 34	AD7	D	50	60	Right-handed alpha
Helix 35	AD8	D	68	75	Right-handed alpha
Helix 36	AD9	D	129	137	Right-handed alpha
Helix 37	AE1	D	207	216	Right-handed alpha
Helix 38	AE2	D	217	226	Right-handed alpha
Helix 39	AE3	D	227	230	Right-handed 310
Helix 40	AE4	D	231	236	Right-handed alpha
Helix 41	AE5	D	250	261	Right-handed alpha
Helix 42	AE6	D	298	308	Right-handed alpha
Helix 43	AE7	E	1	13	Right-handed alpha
Helix 44	AE8	E	50	60	Right-handed alpha
Helix 45	AE9	E	68	75	Right-handed alpha
Helix 46	AF1	E	113	117	Right-handed 310
Helix 47	AF2	E	129	137	Right-handed alpha
Helix 48	AF3	E	207	216	Right-handed alpha
Helix 49	AF4	E	217	225	Right-handed alpha
Helix 50	AF5	E	231	236	Right-handed alpha
Helix 51	AF6	E	250	261	Right-handed alpha
Helix 52	AF7	E	298	308	Right-handed alpha
Helix 53	AF8	F	2	13	Right-handed alpha
Helix 54	AF9	F	50	60	Right-handed alpha
Helix 55	AG1	F	68	75	Right-handed alpha
Helix 56	AG2	F	113	117	Right-handed 310
Helix 57	AG3	F	129	137	Right-handed alpha
Helix 58	AG4	F	207	216	Right-handed alpha
Helix 59	AG5	F	217	225	Right-handed alpha
Helix 60	AG6	F	231	236	Right-handed alpha
Helix 61	AG7	F	250	261	Right-handed alpha
Helix 62	AG8	F	298	307	Right-handed alpha

There are 39 sheets in PDB entry 7RB2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	26	first strand
Strand 2	A	30	35	anti-parallel
Strand 3	A	38	44	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	80	first strand
Strand 2	A	121	124	parallel
Strand 3	A	140	144	parallel
Strand 4	A	177	182	anti-parallel
Strand 5	A	185	186	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	99	first strand
Strand 2	A	106	108	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	162	first strand
Strand 2	A	165	167	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	266	first strand
Strand 2	A	275	281	anti-parallel
Strand 3	A	288	295	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	322	first strand
Strand 2	A	325	334	anti-parallel
Strand 3	A	337	340	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	26	first strand
Strand 2	B	30	35	anti-parallel
Strand 3	B	38	44	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	80	first strand
Strand 2	B	121	124	parallel
Strand 3	B	140	144	parallel
Strand 4	B	177	182	anti-parallel
Strand 5	B	185	186	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	106	108	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	162	first strand
Strand 2	B	165	167	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	266	first strand
Strand 2	B	275	281	anti-parallel
Strand 3	B	288	295	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	322	first strand
Strand 2	B	325	334	anti-parallel
Strand 3	B	337	343	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	26	first strand
Strand 2	C	30	35	anti-parallel
Strand 3	C	38	44	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	80	first strand
Strand 2	C	121	124	parallel
Strand 3	C	140	144	parallel
Strand 4	C	177	182	anti-parallel
Strand 5	C	185	186	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	99	first strand
Strand 2	C	106	108	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	162	first strand
Strand 2	C	165	167	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	266	first strand
Strand 2	C	275	281	anti-parallel
Strand 3	C	288	295	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	315	322	first strand
Strand 2	C	325	334	anti-parallel
Strand 3	C	337	343	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	26	first strand
Strand 2	D	30	35	anti-parallel
Strand 3	D	38	44	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	79	80	first strand
Strand 2	D	121	124	parallel
Strand 3	D	140	144	parallel
Strand 4	D	177	182	anti-parallel
Strand 5	D	185	186	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	87	first strand
Strand 2	D	92	93	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	99	first strand
Strand 2	D	106	108	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	162	first strand
Strand 2	D	165	167	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	264	266	first strand
Strand 2	D	275	281	anti-parallel
Strand 3	D	288	295	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	315	322	first strand
Strand 2	D	325	334	anti-parallel
Strand 3	D	337	340	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	26	first strand
Strand 2	E	30	35	anti-parallel
Strand 3	E	38	44	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	79	80	first strand
Strand 2	E	121	124	parallel
Strand 3	E	140	144	parallel
Strand 4	E	177	178	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	86	87	first strand
Strand 2	E	92	93	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	99	first strand
Strand 2	E	106	108	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	160	162	first strand
Strand 2	E	165	167	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	182	first strand
Strand 2	E	185	186	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	264	266	first strand
Strand 2	E	275	281	anti-parallel
Strand 3	E	288	295	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	315	322	first strand
Strand 2	E	325	334	anti-parallel
Strand 3	E	337	343	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	25	26	first strand
Strand 2	F	30	35	anti-parallel
Strand 3	F	38	44	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	79	80	first strand
Strand 2	F	121	124	parallel
Strand 3	F	140	144	parallel
Strand 4	F	177	182	anti-parallel
Strand 5	F	185	186	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	98	99	first strand
Strand 2	F	106	108	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	162	first strand
Strand 2	F	165	167	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	264	266	first strand
Strand 2	F	275	281	anti-parallel
Strand 3	F	288	295	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	315	322	first strand
Strand 2	F	325	334	anti-parallel
Strand 3	F	337	343	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RB2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RB2