Analysis of interatomic Contacts of Structural Units in PDB entry:
7RB4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RB4 entry

There is 1 chain in PDB entry 7RB4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4VAL 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7RB4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 31Right-handed 310
Helix 2
AA2
A
56 60Right-handed 310
Helix 3
AA3
A
67 73Right-handed alpha
Helix 4
AA4
A
110 121Right-handed alpha
Helix 5
AA5
A
133 139Right-handed alpha
Helix 6
AA6
A
143 151Right-handed alpha
Helix 7
AA7
A
180 188Right-handed alpha
Helix 8
AA8
A
202 206Right-handed 310
Helix 9
AA9
A
207 238Right-handed alpha
Helix 10
AB1
A
253 271Right-handed alpha
Helix 11
AB2
A
272 276Right-handed 310
Helix 12
AB3
A
278 282Right-handed 310
Helix 13
AB4
A
285 304Right-handed alpha
Helix 14
AB5
A
315 332Right-handed alpha
Helix 15
AB6
A
334 338Right-handed 310
Helix 16
AB7
A
339 347Right-handed alpha
Helix 17
AB8
A
350 356Right-handed alpha
Helix 18
AB9
A
365 385Right-handed alpha
Helix 19
AC1
A
386 391Right-handed 310
Helix 20
AC2
A
396 412Right-handed alpha
Helix 21
AC3
A
439 444Right-handed alpha
Helix 22
AC4
A
494 497Right-handed 310
Helix 23
AC5
A
582 586Right-handed 310
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There are 8 sheets in PDB entry 7RB4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
96 102anti-parallel
Strand 3
A
153 157parallel
Strand 4
A
176 179anti-parallel
Strand 5
A
62 65anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 23first strand
Strand 2
A
85 90anti-parallel
Strand 3
A
189 196anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 166first strand
Strand 2
A
419 420anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 430first strand
Strand 2
A
433 437anti-parallel
Strand 3
A
455 464anti-parallel
Strand 4
A
537 545anti-parallel
Strand 5
A
490 492anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 430first strand
Strand 2
A
433 437anti-parallel
Strand 3
A
455 464anti-parallel
Strand 4
A
537 545anti-parallel
Strand 5
A
498 501anti-parallel
Strand 6
A
504 505anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 447first strand
Strand 2
A
603 605parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 475first strand
Strand 2
A
530 531anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 515first strand
Strand 2
A
518 525anti-parallel
Strand 3
A
478 483anti-parallel
Strand 4
A
564 568anti-parallel
Strand 5
A
597 601anti-parallel
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