Analysis of interatomic Contacts of Structural Units in PDB entry:
7RB8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RB8 entry

There are 7 chains in PDB entry 7RB8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	GLU 72
A	GLY 74	PHE 375
D	GLU 1205	ALA 1889
B	ASP 3	GLU 72
B	GLY 74	PHE 375
C	ASP 3	GLU 72
C	GLY 74	PHE 375

There are 91 helices in PDB entry 7RB8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	54	61	Right-handed alpha
Helix 2	AA2	A	78	92	Right-handed alpha
Helix 3	AA3	A	97	101	Right-handed 310
Helix 4	AA4	A	112	126	Right-handed alpha
Helix 5	AA5	A	137	145	Right-handed alpha
Helix 6	AA6	A	172	175	Right-handed 310
Helix 7	AA7	A	181	194	Right-handed alpha
Helix 8	AA8	A	195	197	Right-handed 310
Helix 9	AA9	A	202	217	Right-handed alpha
Helix 10	AB1	A	222	231	Right-handed alpha
Helix 11	AB2	A	252	257	Right-handed alpha
Helix 12	AB3	A	258	262	Right-handed 310
Helix 13	AB4	A	273	283	Right-handed alpha
Helix 14	AB5	A	286	296	Right-handed alpha
Helix 15	AB6	A	301	305	Right-handed 310
Helix 16	AB7	A	308	321	Right-handed alpha
Helix 17	AB8	A	337	349	Right-handed alpha
Helix 18	AB9	A	350	356	Right-handed 310
Helix 19	AC1	A	359	366	Right-handed alpha
Helix 20	AC2	A	367	372	Right-handed 310
Helix 21	AC3	D	1210	1214	Right-handed 310
Helix 22	AC4	D	1218	1232	Right-handed alpha
Helix 23	AC5	D	1257	1263	Right-handed alpha
Helix 24	AC6	D	1264	1268	Right-handed 310
Helix 25	AC7	D	1276	1290	Right-handed alpha
Helix 26	AC8	D	1304	1318	Right-handed alpha
Helix 27	AC9	D	1331	1333	Right-handed 310
Helix 28	AD1	D	1334	1342	Right-handed alpha
Helix 29	AD2	D	1379	1383	Right-handed 310
Helix 30	AD3	D	1393	1402	Right-handed alpha
Helix 31	AD4	D	1404	1411	Right-handed alpha
Helix 32	AD5	D	1419	1424	Right-handed alpha
Helix 33	AD6	D	1435	1449	Right-handed alpha
Helix 34	AD7	D	1452	1471	Right-handed alpha
Helix 35	AD8	D	1489	1499	Right-handed alpha
Helix 36	AD9	D	1503	1512	Right-handed alpha
Helix 37	AE1	D	1528	1559	Right-handed alpha
Helix 38	AE2	D	1583	1616	Right-handed alpha
Helix 39	AE3	D	1617	1620	Right-handed 310
Helix 40	AE4	D	1627	1636	Right-handed alpha
Helix 41	AE5	D	1640	1651	Right-handed alpha
Helix 42	AE6	D	1655	1667	Right-handed alpha
Helix 43	AE7	D	1699	1703	Right-handed 310
Helix 44	AE8	D	1708	1717	Right-handed alpha
Helix 45	AE9	D	1720	1734	Right-handed alpha
Helix 46	AF1	D	1753	1772	Right-handed alpha
Helix 47	AF2	D	1792	1804	Right-handed alpha
Helix 48	AF3	D	1806	1813	Right-handed alpha
Helix 49	AF4	D	1821	1829	Right-handed alpha
Helix 50	AF5	D	1846	1854	Right-handed alpha
Helix 51	AF6	D	1871	1886	Right-handed alpha
Helix 52	AF7	B	54	61	Right-handed alpha
Helix 53	AF8	B	78	92	Right-handed alpha
Helix 54	AF9	B	97	101	Right-handed 310
Helix 55	AG1	B	112	126	Right-handed alpha
Helix 56	AG2	B	137	145	Right-handed alpha
Helix 57	AG3	B	172	175	Right-handed 310
Helix 58	AG4	B	181	194	Right-handed alpha
Helix 59	AG5	B	195	197	Right-handed 310
Helix 60	AG6	B	202	217	Right-handed alpha
Helix 61	AG7	B	222	231	Right-handed alpha
Helix 62	AG8	B	252	257	Right-handed alpha
Helix 63	AG9	B	258	262	Right-handed 310
Helix 64	AH1	B	273	283	Right-handed alpha
Helix 65	AH2	B	286	296	Right-handed alpha
Helix 66	AH3	B	301	305	Right-handed 310
Helix 67	AH4	B	308	321	Right-handed alpha
Helix 68	AH5	B	337	349	Right-handed alpha
Helix 69	AH6	B	350	356	Right-handed 310
Helix 70	AH7	B	359	366	Right-handed alpha
Helix 71	AH8	B	367	372	Right-handed 310
Helix 72	AH9	C	54	61	Right-handed alpha
Helix 73	AI1	C	78	92	Right-handed alpha
Helix 74	AI2	C	97	101	Right-handed 310
Helix 75	AI3	C	112	126	Right-handed alpha
Helix 76	AI4	C	137	145	Right-handed alpha
Helix 77	AI5	C	172	175	Right-handed 310
Helix 78	AI6	C	181	194	Right-handed alpha
Helix 79	AI7	C	195	197	Right-handed 310
Helix 80	AI8	C	202	217	Right-handed alpha
Helix 81	AI9	C	222	231	Right-handed alpha
Helix 82	AJ1	C	252	257	Right-handed alpha
Helix 83	AJ2	C	258	262	Right-handed 310
Helix 84	AJ3	C	273	283	Right-handed alpha
Helix 85	AJ4	C	286	296	Right-handed alpha
Helix 86	AJ5	C	301	305	Right-handed 310
Helix 87	AJ6	C	308	321	Right-handed alpha
Helix 88	AJ7	C	337	349	Right-handed alpha
Helix 89	AJ8	C	350	356	Right-handed 310
Helix 90	AJ9	C	359	366	Right-handed alpha
Helix 91	AK1	C	367	372	Right-handed 310

There are 23 sheets in PDB entry 7RB8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	32	first strand
Strand 2	A	16	21	anti-parallel
Strand 3	A	8	12	anti-parallel
Strand 4	A	103	107	parallel
Strand 5	A	131	136	parallel
Strand 6	A	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	38	first strand
Strand 2	A	65	68	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	B	169	170	anti-parallel
Strand 3	B	160	166	anti-parallel
Strand 4	B	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	B	169	170	anti-parallel
Strand 3	B	160	166	anti-parallel
Strand 4	B	149	155	anti-parallel
Strand 5	B	297	300	parallel
Strand 6	B	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	72	first strand
Strand 2	A	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	160	166	anti-parallel
Strand 3	A	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	160	166	anti-parallel
Strand 3	A	149	155	anti-parallel
Strand 4	A	297	300	parallel
Strand 5	A	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	241	first strand
Strand 2	A	247	250	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1237	1239	first strand
Strand 2	D	1242	1246	anti-parallel
Strand 3	D	1777	1780	parallel
Strand 4	D	1293	1299	parallel
Strand 5	D	1566	1572	parallel
Strand 6	D	1358	1364	anti-parallel
Strand 7	D	1367	1374	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1237	1239	first strand
Strand 2	D	1242	1246	anti-parallel
Strand 3	D	1777	1780	parallel
Strand 4	D	1293	1299	parallel
Strand 5	D	1773	1774	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1343	1346	first strand
Strand 2	D	1349	1353	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1513	1517	first strand
Strand 2	D	1522	1526	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1673	1674	first strand
Strand 2	D	1682	1687	anti-parallel
Strand 3	D	1690	1695	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	32	first strand
Strand 2	B	16	21	anti-parallel
Strand 3	B	8	12	anti-parallel
Strand 4	B	103	107	parallel
Strand 5	B	131	136	parallel
Strand 6	B	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	38	first strand
Strand 2	B	65	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	72	first strand
Strand 2	B	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	241	first strand
Strand 2	B	247	250	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	32	first strand
Strand 2	C	16	21	anti-parallel
Strand 3	C	8	12	anti-parallel
Strand 4	C	103	107	parallel
Strand 5	C	131	136	parallel
Strand 6	C	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	38	first strand
Strand 2	C	65	68	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	72	first strand
Strand 2	C	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	170	first strand
Strand 2	C	160	166	anti-parallel
Strand 3	C	176	178	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	170	first strand
Strand 2	C	160	166	anti-parallel
Strand 3	C	149	155	anti-parallel
Strand 4	C	297	300	parallel
Strand 5	C	329	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	241	first strand
Strand 2	C	247	250	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RB8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RB8