Analysis of interatomic Contacts of Structural Units in PDB entry:
7RBP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RBP entry

There are 2 chains in PDB entry 7RBP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 8THR 336
B
 SER 13ARG 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7RBP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 27Right-handed alpha
Helix 2
AA2
A
28 47Right-handed alpha
Helix 3
AA3
A
87 93Right-handed 310
Helix 4
AA4
A
117 137Right-handed alpha
Helix 5
AA5
A
151 164Right-handed alpha
Helix 6
AA6
A
176 189Right-handed alpha
Helix 7
AA7
A
192 196Right-handed 310
Helix 8
AA8
A
205 211Right-handed alpha
Helix 9
AA9
A
222 226Right-handed 310
Helix 10
AB1
A
228 232Right-handed 310
Helix 11
AB2
A
252 259Right-handed alpha
Helix 12
AB3
A
267 272Right-handed alpha
Helix 13
AB4
A
272 280Right-handed alpha
Helix 14
AB5
A
293 298Right-handed alpha
Helix 15
AB6
A
318 335Right-handed alpha
Helix 16
AB7
B
19 27Right-handed alpha
Helix 17
AB8
B
28 47Right-handed alpha
Helix 18
AB9
B
87 93Right-handed 310
Helix 19
AC1
B
117 137Right-handed alpha
Helix 20
AC2
B
151 164Right-handed alpha
Helix 21
AC3
B
267 272Right-handed alpha
Helix 22
AC4
B
272 281Right-handed alpha
Helix 23
AC5
B
285 289Right-handed 310
Helix 24
AC6
B
293 299Right-handed alpha
Helix 25
AC7
B
318 334Right-handed alpha
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There are 4 sheets in PDB entry 7RBP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
111 116parallel
Strand 3
A
97 105anti-parallel
Strand 4
A
77 85anti-parallel
Strand 5
A
61 69anti-parallel
Strand 6
A
53 58anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 203first strand
Strand 2
A
169 173parallel
Strand 3
A
143 147parallel
Strand 4
A
215 218parallel
Strand 5
A
237 241parallel
Strand 6
A
311 315parallel
Strand 7
A
260 263parallel
Strand 8
A
291 292parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
111 116parallel
Strand 3
B
97 105anti-parallel
Strand 4
B
77 85anti-parallel
Strand 5
B
61 70anti-parallel
Strand 6
B
53 58anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
216 218parallel
Strand 3
B
238 241parallel
Strand 4
B
311 315parallel
Strand 5
B
260 263parallel
Strand 6
B
291 292parallel
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