Analysis of interatomic Contacts of Structural Units in PDB entry:
7RBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RBW entry

There are 2 chains in PDB entry 7RBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 28LYS 417
B
 ASP 29LYS 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7RBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 71Right-handed alpha
Helix 2
AA2
A
79 93Right-handed alpha
Helix 3
AA3
A
95 106Right-handed alpha
Helix 4
AA4
A
114 131Right-handed alpha
Helix 5
AA5
A
153 165Right-handed alpha
Helix 6
AA6
A
175 191Right-handed alpha
Helix 7
AA7
A
225 229Right-handed 310
Helix 8
AA8
A
283 289Right-handed alpha
Helix 9
AA9
A
292 303Right-handed alpha
Helix 10
AB1
A
323 330Right-handed alpha
Helix 11
AB2
A
333 337Right-handed 310
Helix 12
AB3
B
50 71Right-handed alpha
Helix 13
AB4
B
79 93Right-handed alpha
Helix 14
AB5
B
95 106Right-handed alpha
Helix 15
AB6
B
114 131Right-handed alpha
Helix 16
AB7
B
153 163Right-handed alpha
Helix 17
AB8
B
175 192Right-handed alpha
Helix 18
AB9
B
225 229Right-handed 310
Helix 19
AC1
B
283 289Right-handed alpha
Helix 20
AC2
B
292 303Right-handed alpha
Helix 21
AC3
B
323 330Right-handed alpha
Helix 22
AC4
B
333 337Right-handed 310
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There are 6 sheets in PDB entry 7RBW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 78first strand
Strand 2
A
406 412anti-parallel
Strand 3
A
394 400anti-parallel
Strand 4
A
272 279anti-parallel
Strand 5
A
261 268anti-parallel
Strand 6
A
240 257anti-parallel
Strand 7
A
230 237anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 78first strand
Strand 2
A
406 412anti-parallel
Strand 3
A
394 400anti-parallel
Strand 4
A
272 279anti-parallel
Strand 5
A
261 268anti-parallel
Strand 6
A
240 257anti-parallel
Strand 7
A
304 313anti-parallel
Strand 8
A
387 389parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 171first strand
Strand 2
A
138 147parallel
Strand 3
A
208 217anti-parallel
Strand 4
A
353 364parallel
Strand 5
A
315 322anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 78first strand
Strand 2
B
406 412anti-parallel
Strand 3
B
394 400anti-parallel
Strand 4
B
272 279anti-parallel
Strand 5
B
261 267anti-parallel
Strand 6
B
240 257anti-parallel
Strand 7
B
230 237anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 78first strand
Strand 2
B
406 412anti-parallel
Strand 3
B
394 400anti-parallel
Strand 4
B
272 279anti-parallel
Strand 5
B
261 267anti-parallel
Strand 6
B
240 257anti-parallel
Strand 7
B
304 313anti-parallel
Strand 8
B
387 389parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 171first strand
Strand 2
B
138 147parallel
Strand 3
B
208 217anti-parallel
Strand 4
B
355 364parallel
Strand 5
B
315 322anti-parallel
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