Analysis of interatomic Contacts of Structural Units in PDB entry:
7RBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RBX entry

There are 4 chains in PDB entry 7RBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3PRO 426
B
 THR 2LYS 425
C
 THR 2PRO 426
D
 THR 2GLU 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 85 helices in PDB entry 7RBX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 8Right-handed alpha
Helix 2
AA2
A
24 32Right-handed alpha
Helix 3
AA3
A
39 56Right-handed alpha
Helix 4
AA4
A
66 76Right-handed alpha
Helix 5
AA5
A
84 92Right-handed alpha
Helix 6
AA6
A
108 132Right-handed alpha
Helix 7
AA7
A
154 169Right-handed alpha
Helix 8
AA8
A
179 183Right-handed 310
Helix 9
AA9
A
195 214Right-handed alpha
Helix 10
AB1
A
239 243Right-handed 310
Helix 11
AB2
A
244 248Right-handed 310
Helix 12
AB3
A
260 272Right-handed alpha
Helix 13
AB4
A
273 275Right-handed 310
Helix 14
AB5
A
286 301Right-handed alpha
Helix 15
AB6
A
315 320Right-handed alpha
Helix 16
AB7
A
321 335Right-handed alpha
Helix 17
AB8
A
344 365Right-handed alpha
Helix 18
AB9
A
365 380Right-handed alpha
Helix 19
AC1
A
381 383Right-handed 310
Helix 20
AC2
A
388 393Right-handed alpha
Helix 21
AC3
A
394 406Right-handed alpha
Helix 22
AC4
A
418 424Right-handed alpha
Helix 23
AC5
B
3 8Right-handed alpha
Helix 24
AC6
B
24 32Right-handed alpha
Helix 25
AC7
B
39 56Right-handed alpha
Helix 26
AC8
B
66 76Right-handed alpha
Helix 27
AC9
B
84 92Right-handed alpha
Helix 28
AD1
B
108 132Right-handed alpha
Helix 29
AD2
B
154 169Right-handed alpha
Helix 30
AD3
B
179 183Right-handed 310
Helix 31
AD4
B
195 214Right-handed alpha
Helix 32
AD5
B
239 243Right-handed 310
Helix 33
AD6
B
260 272Right-handed alpha
Helix 34
AD7
B
273 275Right-handed 310
Helix 35
AD8
B
286 301Right-handed alpha
Helix 36
AD9
B
315 320Right-handed alpha
Helix 37
AE1
B
321 335Right-handed alpha
Helix 38
AE2
B
344 365Right-handed alpha
Helix 39
AE3
B
365 380Right-handed alpha
Helix 40
AE4
B
381 383Right-handed 310
Helix 41
AE5
B
388 393Right-handed alpha
Helix 42
AE6
B
394 406Right-handed alpha
Helix 43
AE7
B
418 424Right-handed alpha
Helix 44
AE8
C
24 32Right-handed alpha
Helix 45
AE9
C
39 56Right-handed alpha
Helix 46
AF1
C
66 76Right-handed alpha
Helix 47
AF2
C
84 92Right-handed alpha
Helix 48
AF3
C
108 132Right-handed alpha
Helix 49
AF4
C
154 169Right-handed alpha
Helix 50
AF5
C
179 183Right-handed 310
Helix 51
AF6
C
195 214Right-handed alpha
Helix 52
AF7
C
239 243Right-handed 310
Helix 53
AF8
C
244 248Right-handed 310
Helix 54
AF9
C
260 272Right-handed alpha
Helix 55
AG1
C
273 275Right-handed 310
Helix 56
AG2
C
286 301Right-handed alpha
Helix 57
AG3
C
315 320Right-handed alpha
Helix 58
AG4
C
321 335Right-handed alpha
Helix 59
AG5
C
344 365Right-handed alpha
Helix 60
AG6
C
365 380Right-handed alpha
Helix 61
AG7
C
381 383Right-handed 310
Helix 62
AG8
C
388 393Right-handed alpha
Helix 63
AG9
C
394 406Right-handed alpha
Helix 64
AH1
C
418 424Right-handed alpha
Helix 65
AH2
D
4 8Right-handed 310
Helix 66
AH3
D
24 32Right-handed alpha
Helix 67
AH4
D
39 56Right-handed alpha
Helix 68
AH5
D
66 77Right-handed alpha
Helix 69
AH6
D
84 92Right-handed alpha
Helix 70
AH7
D
108 132Right-handed alpha
Helix 71
AH8
D
154 169Right-handed alpha
Helix 72
AH9
D
179 183Right-handed 310
Helix 73
AI1
D
195 214Right-handed alpha
Helix 74
AI2
D
239 243Right-handed 310
Helix 75
AI3
D
260 272Right-handed alpha
Helix 76
AI4
D
273 275Right-handed 310
Helix 77
AI5
D
286 301Right-handed alpha
Helix 78
AI6
D
315 320Right-handed alpha
Helix 79
AI7
D
321 335Right-handed alpha
Helix 80
AI8
D
344 365Right-handed alpha
Helix 81
AI9
D
365 380Right-handed alpha
Helix 82
AJ1
D
381 383Right-handed 310
Helix 83
AJ2
D
388 393Right-handed alpha
Helix 84
AJ3
D
394 407Right-handed alpha
Helix 85
AJ4
D
418 424Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 7RBX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
337 342parallel
Strand 3
A
306 309parallel
Strand 4
A
277 280parallel
Strand 5
A
218 223parallel
Strand 6
A
172 176parallel
Strand 7
A
144 147parallel
Strand 8
A
81 83parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
230 231parallel
Strand 3
A
255 256anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 62first strand
Strand 2
B
337 342parallel
Strand 3
B
306 309parallel
Strand 4
B
277 280parallel
Strand 5
B
218 223parallel
Strand 6
B
172 176parallel
Strand 7
B
144 147parallel
Strand 8
B
81 83parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 193first strand
Strand 2
B
230 231parallel
Strand 3
B
255 256anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 62first strand
Strand 2
C
337 342parallel
Strand 3
C
305 309parallel
Strand 4
C
277 280parallel
Strand 5
C
218 223parallel
Strand 6
C
172 176parallel
Strand 7
C
144 147parallel
Strand 8
C
81 83parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
192 193first strand
Strand 2
C
230 231parallel
Strand 3
C
255 256anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 62first strand
Strand 2
D
337 342parallel
Strand 3
D
306 309parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
81 83first strand
Strand 2
D
144 147parallel
Strand 3
D
172 176parallel
Strand 4
D
218 223parallel
Strand 5
D
277 280parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
192 193first strand
Strand 2
D
230 231parallel
Strand 3
D
255 256anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il