Analysis of interatomic Contacts of Structural Units in PDB entry:
7RC5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RC5 entry

There is 1 chain in PDB entry 7RC5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ARG 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7RC5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 19Right-handed alpha
Helix 2
AA2
A
20 30Right-handed alpha
Helix 3
AA3
A
45 56Right-handed alpha
Helix 4
AA4
A
60 62Right-handed 310
Helix 5
AA5
A
63 71Right-handed alpha
Helix 6
AA6
A
78 80Right-handed 310
Helix 7
AA7
A
81 94Right-handed alpha
Helix 8
AA8
A
126 128Right-handed 310
Helix 9
AA9
A
139 148Right-handed alpha
Helix 10
AB1
A
150 154Right-handed 310
Helix 11
AB2
A
168 175Right-handed alpha
Helix 12
AB3
A
187 201Right-handed alpha
Helix 13
AB4
A
214 221Right-handed alpha
Helix 14
AB5
A
255 268Right-handed alpha
Helix 15
AB6
A
289 302Right-handed alpha
Helix 16
AB7
A
315 330Right-handed alpha
Helix 17
AB8
A
337 349Right-handed alpha
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There are 3 sheets in PDB entry 7RC5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
105 108anti-parallel
Strand 3
A
97 99anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 116first strand
Strand 2
A
119 124anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 212first strand
Strand 2
A
180 185parallel
Strand 3
A
159 163parallel
Strand 4
A
225 230parallel
Strand 5
A
269 283parallel
Strand 6
A
354 363anti-parallel
Strand 7
A
304 314anti-parallel
Strand 8
A
370 374parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il