Analysis of interatomic Contacts of Structural Units in PDB entry:
7RCK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RCK entry

There are 2 chains in PDB entry 7RCK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 33ASP 364
B
 VAL 32ASP 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7RCK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 49Right-handed alpha
Helix 2
AA2
A
76 84Right-handed 310
Helix 3
AA3
A
110 118Right-handed alpha
Helix 4
AA4
A
166 175Right-handed alpha
Helix 5
AA5
A
176 195Right-handed alpha
Helix 6
AA6
A
222 232Right-handed alpha
Helix 7
AA7
A
232 237Right-handed alpha
Helix 8
AA8
A
248 255Right-handed alpha
Helix 9
AA9
A
299 314Right-handed alpha
Helix 10
AB1
A
328 330Right-handed 310
Helix 11
AB2
A
347 364Right-handed alpha
Helix 12
AB3
B
34 49Right-handed alpha
Helix 13
AB4
B
76 84Right-handed 310
Helix 14
AB5
B
110 118Right-handed alpha
Helix 15
AB6
B
166 176Right-handed alpha
Helix 16
AB7
B
176 195Right-handed alpha
Helix 17
AB8
B
222 232Right-handed alpha
Helix 18
AB9
B
232 237Right-handed alpha
Helix 19
AC1
B
248 255Right-handed alpha
Helix 20
AC2
B
299 314Right-handed alpha
Helix 21
AC3
B
347 364Right-handed alpha
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There are 5 sheets in PDB entry 7RCK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 149first strand
Strand 2
A
132 137anti-parallel
Strand 3
A
119 125anti-parallel
Strand 4
A
154 160anti-parallel
Strand 5
A
65 70anti-parallel
Strand 6
A
53 59anti-parallel
Strand 7
A
199 205parallel
Strand 8
A
212 216anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 241first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
321 326anti-parallel
Strand 4
A
288 292parallel
Strand 5
A
295 297anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
344 345anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 149first strand
Strand 2
B
132 137anti-parallel
Strand 3
B
119 125anti-parallel
Strand 4
B
154 160anti-parallel
Strand 5
B
65 70anti-parallel
Strand 6
B
53 59anti-parallel
Strand 7
B
199 205parallel
Strand 8
B
211 216anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 241first strand
Strand 2
B
268 274anti-parallel
Strand 3
B
321 326anti-parallel
Strand 4
B
288 292parallel
Strand 5
B
295 297anti-parallel
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