Analysis of interatomic Contacts of Structural Units in PDB entry:
7RCZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RCZ entry

There are 2 chains in PDB entry 7RCZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 56	TYR 585
B	ILE 55	TYR 585

There are 48 helices in PDB entry 7RCZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	83	86	Right-handed 310
Helix 2	AA2	A	88	101	Right-handed alpha
Helix 3	AA3	A	103	112	Right-handed alpha
Helix 4	AA4	A	126	136	Right-handed alpha
Helix 5	AA5	A	157	162	Right-handed alpha
Helix 6	AA6	A	173	178	Right-handed alpha
Helix 7	AA7	A	178	183	Right-handed alpha
Helix 8	AA8	A	221	239	Right-handed alpha
Helix 9	AA9	A	266	270	Right-handed 310
Helix 10	AB1	A	275	283	Right-handed alpha
Helix 11	AB2	A	284	285	Right-handed 310
Helix 12	AB3	A	286	288	Right-handed 310
Helix 13	AB4	A	289	299	Right-handed alpha
Helix 14	AB5	A	300	305	Right-handed alpha
Helix 15	AB6	A	309	312	Right-handed 310
Helix 16	AB7	A	313	325	Right-handed alpha
Helix 17	AB8	A	359	366	Right-handed alpha
Helix 18	AB9	A	368	391	Right-handed alpha
Helix 19	AC1	A	411	415	Right-handed 310
Helix 20	AC2	A	416	424	Right-handed alpha
Helix 21	AC3	A	432	444	Right-handed alpha
Helix 22	AC4	A	479	496	Right-handed alpha
Helix 23	AC5	A	499	503	Right-handed 310
Helix 24	AC6	A	559	564	Right-handed alpha
Helix 25	AC7	A	564	579	Right-handed alpha
Helix 26	AC8	B	83	86	Right-handed 310
Helix 27	AC9	B	88	100	Right-handed alpha
Helix 28	AD1	B	105	112	Right-handed alpha
Helix 29	AD2	B	126	137	Right-handed alpha
Helix 30	AD3	B	157	162	Right-handed alpha
Helix 31	AD4	B	173	178	Right-handed alpha
Helix 32	AD5	B	178	183	Right-handed alpha
Helix 33	AD6	B	221	239	Right-handed alpha
Helix 34	AD7	B	266	270	Right-handed 310
Helix 35	AD8	B	275	283	Right-handed alpha
Helix 36	AD9	B	286	289	Right-handed 310
Helix 37	AE1	B	290	298	Right-handed alpha
Helix 38	AE2	B	300	305	Right-handed alpha
Helix 39	AE3	B	309	312	Right-handed 310
Helix 40	AE4	B	313	325	Right-handed alpha
Helix 41	AE5	B	359	366	Right-handed alpha
Helix 42	AE6	B	368	391	Right-handed alpha
Helix 43	AE7	B	415	424	Right-handed alpha
Helix 44	AE8	B	432	444	Right-handed alpha
Helix 45	AE9	B	479	497	Right-handed alpha
Helix 46	AF1	B	499	503	Right-handed 310
Helix 47	AF2	B	559	564	Right-handed alpha
Helix 48	AF3	B	564	579	Right-handed alpha

There are 14 sheets in PDB entry 7RCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	125	first strand
Strand 2	A	69	81	anti-parallel
Strand 3	A	141	150	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	125	first strand
Strand 2	A	69	81	anti-parallel
Strand 3	A	62	63	anti-parallel
Strand 4	A	216	218	parallel
Strand 5	A	455	459	anti-parallel
Strand 6	A	465	468	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	164	first strand
Strand 2	A	170	172	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	262	first strand
Strand 2	A	243	249	anti-parallel
Strand 3	A	544	551	anti-parallel
Strand 4	A	523	537	anti-parallel
Strand 5	A	510	520	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	333	335	first strand
Strand 2	A	356	358	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	338	341	first strand
Strand 2	A	344	347	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	408	409	first strand
Strand 2	A	429	430	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	450	first strand
Strand 2	A	473	476	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	125	first strand
Strand 2	B	69	81	anti-parallel
Strand 3	B	141	150	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	125	first strand
Strand 2	B	69	81	anti-parallel
Strand 3	B	62	63	anti-parallel
Strand 4	B	215	218	parallel
Strand 5	B	455	459	anti-parallel
Strand 6	B	465	468	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	164	first strand
Strand 2	B	170	172	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	262	first strand
Strand 2	B	243	249	anti-parallel
Strand 3	B	544	551	anti-parallel
Strand 4	B	523	537	anti-parallel
Strand 5	B	510	520	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	335	first strand
Strand 2	B	356	358	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	450	first strand
Strand 2	B	473	476	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RCZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RCZ