Analysis of interatomic Contacts of Structural Units in PDB entry:
7RE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RE2 entry

There are 7 chains in PDB entry 7RE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3THR 929
B
 PHE 6ALA 191
C
 SER 1MET 75
D
 SER 7ALA 191
E
 ALA 1LEU 590
P
 G 2 A 35
T
 U 18 C 54
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 7RE2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 13Right-handed alpha
Helix 2
AA2
A
76 90Right-handed alpha
Helix 3
AA3
A
123 133Right-handed alpha
Helix 4
AA4
A
140 149Right-handed alpha
Helix 5
AA5
A
155 159Right-handed 310
Helix 6
AA6
A
170 177Right-handed alpha
Helix 7
AA7
A
178 200Right-handed alpha
Helix 8
AA8
A
206 210Right-handed 310
Helix 9
AA9
A
234 248Right-handed alpha
Helix 10
AB1
A
251 255Right-handed 310
Helix 11
AB2
A
256 260Right-handed 310
Helix 12
AB3
A
275 287Right-handed alpha
Helix 13
AB4
A
297 301Right-handed 310
Helix 14
AB5
A
303 318Right-handed alpha
Helix 15
AB6
A
367 377Right-handed alpha
Helix 16
AB7
A
378 384Right-handed alpha
Helix 17
AB8
A
416 426Right-handed alpha
Helix 18
AB9
A
447 454Right-handed alpha
Helix 19
AC1
A
455 459Right-handed 310
Helix 20
AC2
A
465 480Right-handed alpha
Helix 21
AC3
A
489 493Right-handed 310
Helix 22
AC4
A
505 509Right-handed 310
Helix 23
AC5
A
511 519Right-handed alpha
Helix 24
AC6
A
520 532Right-handed alpha
Helix 25
AC7
A
561 580Right-handed alpha
Helix 26
AC8
A
596 606Right-handed alpha
Helix 27
AC9
A
621 626Right-handed alpha
Helix 28
AD1
A
627 639Right-handed alpha
Helix 29
AD2
A
647 663Right-handed alpha
Helix 30
AD3
A
687 709Right-handed alpha
Helix 31
AD4
A
717 733Right-handed alpha
Helix 32
AD5
A
738 753Right-handed alpha
Helix 33
AD6
A
768 774Right-handed alpha
Helix 34
AD7
A
778 790Right-handed alpha
Helix 35
AD8
A
804 808Right-handed 310
Helix 36
AD9
A
833 842Right-handed alpha
Helix 37
AE1
A
846 851Right-handed 310
Helix 38
AE2
A
856 867Right-handed alpha
Helix 39
AE3
A
868 872Right-handed 310
Helix 40
AE4
A
874 903Right-handed alpha
Helix 41
AE5
A
911 915Right-handed 310
Helix 42
AE6
A
917 923Right-handed alpha
Helix 43
AE7
A
924 926Right-handed 310
Helix 44
AE8
B
9 29Right-handed alpha
Helix 45
AE9
B
31 98Right-handed alpha
Helix 46
AF1
B
99 110Right-handed alpha
Helix 47
AF2
B
119 125Right-handed alpha
Helix 48
AF3
B
134 143Right-handed alpha
Helix 49
AF4
B
168 172Right-handed 310
Helix 50
AF5
B
176 180Right-handed 310
Helix 51
AF6
C
2 20Right-handed alpha
Helix 52
AF7
C
21 24Right-handed 310
Helix 53
AF8
C
25 41Right-handed alpha
Helix 54
AF9
C
44 62Right-handed alpha
Helix 55
AG1
C
67 73Right-handed alpha
Helix 56
AG2
D
9 29Right-handed alpha
Helix 57
AG3
D
32 82Right-handed alpha
Helix 58
AG4
D
83 99Right-handed alpha
Helix 59
AG5
D
100 113Right-handed alpha
Helix 60
AG6
D
134 141Right-handed alpha
Helix 61
AG7
D
168 172Right-handed 310
Helix 62
AG8
D
176 180Right-handed 310
Helix 63
AG9
E
26 35Right-handed alpha
Helix 64
AH1
E
59 63Right-handed 310
Helix 65
AH2
E
93 97Right-handed 310
Helix 66
AH3
E
102 112Right-handed alpha
Helix 67
AH4
E
116 124Right-handed alpha
Helix 68
AH5
E
127 145Right-handed alpha
Helix 69
AH6
E
146 149Right-handed 310
Helix 70
AH7
E
262 264Right-handed 310
Helix 71
AH8
E
265 275Right-handed alpha
Helix 72
AH9
E
287 299Right-handed alpha
Helix 73
AI1
E
311 325Right-handed alpha
Helix 74
AI2
E
361 363Right-handed 310
Helix 75
AI3
E
376 379Right-handed 310
Helix 76
AI4
E
380 390Right-handed alpha
Helix 77
AI5
E
418 422Right-handed 310
Helix 78
AI6
E
423 432Right-handed alpha
Helix 79
AI7
E
445 453Right-handed alpha
Helix 80
AI8
E
489 499Right-handed alpha
Helix 81
AI9
E
503 507Right-handed 310
Helix 82
AJ1
E
515 527Right-handed alpha
Helix 83
AJ2
E
532 537Right-handed alpha
Helix 84
AJ3
E
557 566Right-handed alpha
Helix 85
AJ4
E
578 585Right-handed alpha
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There are 21 sheets in PDB entry 7RE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
55 60anti-parallel
Strand 3
A
64 71anti-parallel
Strand 4
A
110 119anti-parallel
Strand 5
A
99 105anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
43 45anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
232 233parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 355first strand
Strand 2
A
342 348anti-parallel
Strand 3
A
327 331anti-parallel
Strand 4
B
114 116anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
A
334 335anti-parallel
Strand 3
A
362 363parallel
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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 560first strand
Strand 2
A
540 544anti-parallel
Strand 3
A
666 668parallel
Strand 4
A
672 675anti-parallel
Strand 5
A
397 400anti-parallel
Strand 6
A
386 390anti-parallel
Strand 7
B
127 132parallel
Strand 8
B
184 190anti-parallel
Strand 9
B
152 160anti-parallel
Strand 10
B
146 149anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
843 844anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 758first strand
Strand 2
A
761 767anti-parallel
Strand 3
A
612 616anti-parallel
Strand 4
A
800 802anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 822first strand
Strand 2
A
825 831anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 132first strand
Strand 2
D
184 190anti-parallel
Strand 3
D
152 160anti-parallel
Strand 4
D
146 149anti-parallel
Strand 5
D
142 143anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 132first strand
Strand 2
D
184 190anti-parallel
Strand 3
D
152 160anti-parallel
Strand 4
D
166 167anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 4first strand
Strand 2
E
11 12anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 25first strand
Strand 2
E
14 16anti-parallel
Strand 3
E
42 43anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
64 66first strand
Strand 2
E
69 71anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
84 85first strand
Strand 2
E
88 89anti-parallel
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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
166 167first strand
Strand 2
E
152 153anti-parallel
Strand 3
E
224 227anti-parallel
Strand 4
E
181 185anti-parallel
Strand 5
E
194 199anti-parallel
Strand 6
E
212 213anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
162 164first strand
Strand 2
E
208 210anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
356 359first strand
Strand 2
E
304 308parallel
Strand 3
E
370 374parallel
Strand 4
E
396 400parallel
Strand 5
E
277 281parallel
Strand 6
E
436 437parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
366 368first strand
Strand 2
E
391 393parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
471 475first strand
Strand 2
E
568 576parallel
Strand 3
E
541 547parallel
Strand 4
E
510 512parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
481 482first strand
Strand 2
E
487 488anti-parallel
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