Analysis of interatomic Contacts of Structural Units in PDB entry:
7REO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7REO entry

There is 1 chain in PDB entry 7REO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LYS 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 7REO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 157Right-handed alpha
Helix 2
AA2
A
158 160Right-handed 310
Helix 3
AA3
A
162 171Right-handed alpha
Helix 4
AA4
A
222 226Right-handed 310
Helix 5
AA5
A
264 273Right-handed alpha
Helix 6
AA6
A
278 291Right-handed alpha
Helix 7
AA7
A
295 307Right-handed alpha
Helix 8
AA8
A
314 325Right-handed alpha
Helix 9
AA9
A
342 358Right-handed alpha
Helix 10
AB1
A
358 363Right-handed alpha
Helix 11
AB2
A
366 372Right-handed 310
Helix 12
AB3
A
390 402Right-handed alpha
Helix 13
AB4
A
403 405Right-handed 310
Helix 14
AB5
A
418 439Right-handed alpha
Helix 15
AB6
A
441 445Right-handed 310
Helix 16
AB7
A
466 470Right-handed 310
Helix 17
AB8
A
524 530Right-handed alpha
Helix 18
AB9
A
539 546Right-handed alpha
Helix 19
AC1
A
578 607Right-handed alpha
Helix 20
AC2
A
609 614Right-handed alpha
Helix 21
AC3
A
617 627Right-handed alpha
Helix 22
AC4
A
629 639Right-handed alpha
Helix 23
AC5
A
641 665Right-handed alpha
Helix 24
AC6
A
665 670Right-handed alpha
Helix 25
AC7
A
671 678Right-handed alpha
Helix 26
AC8
A
685 697Right-handed alpha
Helix 27
AC9
A
697 702Right-handed alpha
Helix 28
AD1
A
706 722Right-handed alpha
Helix 29
AD2
A
722 734Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 7REO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 239first strand
Strand 2
A
2 6anti-parallel
Strand 3
A
16 21anti-parallel
Strand 4
A
483 488anti-parallel
Strand 5
A
497 502anti-parallel
Strand 6
A
534 535anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 230first strand
Strand 2
A
188 193anti-parallel
Strand 3
A
177 183anti-parallel
Strand 4
A
63 68anti-parallel
Strand 5
A
57 59anti-parallel
Strand 6
A
42 49anti-parallel
Strand 7
A
32 39anti-parallel
Strand 8
A
572 575parallel
Strand 9
A
561 567anti-parallel
Strand 10
A
547 554anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 130first strand
Strand 2
A
135 141anti-parallel
Strand 3
A
75 81anti-parallel
Strand 4
A
209 210parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 92first strand
Strand 2
A
95 98anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 106first strand
Strand 2
A
114 120anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 198first strand
Strand 2
A
219 220anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
A
471 473anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il