Analysis of interatomic Contacts of Structural Units in PDB entry:
7REU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7REU entry

There are 2 chains in PDB entry 7REU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5GLY 365
B
 GLU 8GLY 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7REU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 31Right-handed alpha
Helix 2
AA2
A
34 53Right-handed alpha
Helix 3
AA3
A
70 88Right-handed alpha
Helix 4
AA4
A
123 140Right-handed alpha
Helix 5
AA5
A
154 163Right-handed 310
Helix 6
AA6
A
175 183Right-handed alpha
Helix 7
AA7
A
199 210Right-handed alpha
Helix 8
AA8
A
249 262Right-handed alpha
Helix 9
AA9
A
275 280Right-handed 310
Helix 10
AB1
A
284 300Right-handed alpha
Helix 11
AB2
A
342 365Right-handed alpha
Helix 12
AB3
B
23 31Right-handed alpha
Helix 13
AB4
B
34 53Right-handed alpha
Helix 14
AB5
B
70 88Right-handed alpha
Helix 15
AB6
B
123 141Right-handed alpha
Helix 16
AB7
B
155 160Right-handed alpha
Helix 17
AB8
B
161 163Right-handed 310
Helix 18
AB9
B
175 183Right-handed alpha
Helix 19
AC1
B
199 210Right-handed alpha
Helix 20
AC2
B
249 262Right-handed alpha
Helix 21
AC3
B
275 280Right-handed 310
Helix 22
AC4
B
282 284Right-handed 310
Helix 23
AC5
B
285 300Right-handed alpha
Helix 24
AC6
B
326 330Right-handed 310
Helix 25
AC7
B
342 364Right-handed alpha
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There are 4 sheets in PDB entry 7REU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 20first strand
Strand 2
B
224 229anti-parallel
Strand 3
B
214 218anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
92 97parallel
Strand 3
A
146 149parallel
Strand 4
A
165 168parallel
Strand 5
A
189 192parallel
Strand 6
A
235 239parallel
Strand 7
A
270 273parallel
Strand 8
A
304 310parallel
Strand 9
A
59 64parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 218first strand
Strand 2
A
224 229anti-parallel
Strand 3
B
15 20anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 64first strand
Strand 2
B
92 97parallel
Strand 3
B
146 149parallel
Strand 4
B
165 168parallel
Strand 5
B
189 192parallel
Strand 6
B
235 239parallel
Strand 7
B
270 273parallel
Strand 8
B
304 310parallel
Strand 9
B
59 64parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il