Analysis of interatomic Contacts of Structural Units in PDB entry:
7RGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RGW entry

There is 1 chain in PDB entry 7RGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 2774ARG 2914
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 7RGW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
2781 2785Right-handed alpha
Helix 2
AA2
A
2794 2798Right-handed 310
Helix 3
AA3
A
2799 2804Right-handed alpha
Helix 4
AA4
A
2838 2844Right-handed 310
Helix 5
AA5
A
2897 2899Right-handed 310
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There are 3 sheets in PDB entry 7RGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2778 2779first strand
Strand 2
A
2906 2913anti-parallel
Strand 3
A
2828 2836anti-parallel
Strand 4
A
2874 2879anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2786 2791first strand
Strand 2
A
2818 2824anti-parallel
Strand 3
A
2887 2895anti-parallel
Strand 4
A
2846 2854anti-parallel
Strand 5
A
2861 2867anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2809 2810first strand
Strand 2
A
2903 2904anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il