Analysis of interatomic Contacts of Structural Units in PDB entry:
7RHQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RHQ entry

There are 3 chains in PDB entry 7RHQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 69PRO 1169
C
 CYS 24GLY 197
G
 ARG 45CYS 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 7RHQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 87Right-handed alpha
Helix 2
AA2
A
87 105Right-handed alpha
Helix 3
AA3
A
106 108Right-handed 310
Helix 4
AA4
A
114 118Right-handed 310
Helix 5
AA5
A
124 131Right-handed alpha
Helix 6
AA6
A
138 141Right-handed 310
Helix 7
AA7
A
163 176Right-handed alpha
Helix 8
AA8
A
188 192Right-handed 310
Helix 9
AA9
A
206 211Right-handed alpha
Helix 10
AB1
A
220 232Right-handed 310
Helix 11
AB2
A
250 259Right-handed alpha
Helix 12
AB3
A
265 276Right-handed alpha
Helix 13
AB4
A
308 313Right-handed alpha
Helix 14
AB5
A
358 366Right-handed alpha
Helix 15
AB6
A
378 400Right-handed alpha
Helix 16
AB7
A
413 423Right-handed alpha
Helix 17
AB8
A
428 446Right-handed alpha
Helix 18
AB9
A
456 481Right-handed alpha
Helix 19
AC1
A
492 516Right-handed alpha
Helix 20
AC2
A
526 550Right-handed alpha
Helix 21
AC3
A
557 581Right-handed alpha
Helix 22
AC4
A
581 592Right-handed alpha
Helix 23
AC5
A
726 731Right-handed alpha
Helix 24
AC6
A
732 734Right-handed 310
Helix 25
AC7
A
736 758Right-handed alpha
Helix 26
AC8
A
766 770Right-handed 310
Helix 27
AC9
A
776 785Right-handed alpha
Helix 28
AD1
A
806 815Right-handed alpha
Helix 29
AD2
A
816 818Right-handed 310
Helix 30
AD3
A
833 855Right-handed alpha
Helix 31
AD4
A
867 879Right-handed alpha
Helix 32
AD5
A
908 920Right-handed alpha
Helix 33
AD6
A
920 927Right-handed alpha
Helix 34
AD7
A
972 991Right-handed alpha
Helix 35
AD8
A
1001 1005Right-handed 310
Helix 36
AD9
A
1013 1037Right-handed alpha
Helix 37
AE1
A
1038 1064Right-handed alpha
Helix 38
AE2
A
1068 1096Right-handed alpha
Helix 39
AE3
A
1099 1112Right-handed alpha
Helix 40
AE4
A
1112 1126Right-handed alpha
Helix 41
AE5
A
1127 1130Right-handed 310
Helix 42
AE6
A
1134 1141Right-handed alpha
Helix 43
AE7
A
1141 1157Right-handed alpha
Helix 44
AE8
A
1158 1167Right-handed alpha
Helix 45
AE9
C
99 117Right-handed alpha
Helix 46
AF1
C
138 143Right-handed 310
Helix 47
AF2
C
154 156Right-handed 310
Helix 48
AF3
C
157 168Right-handed alpha
Helix 49
AF4
G
47 56Right-handed alpha
Helix 50
AF5
G
60 72Right-handed alpha
Helix 51
AF6
G
72 80Right-handed alpha
Helix 52
AF7
G
108 119Right-handed alpha
Helix 53
AF8
G
122 126Right-handed 310
Helix 54
AF9
G
136 144Right-handed alpha
Helix 55
AG1
G
167 176Right-handed alpha
Helix 56
AG2
G
176 190Right-handed alpha
Helix 57
AG3
G
190 195Right-handed alpha
Helix 58
AG4
G
200 211Right-handed alpha
Helix 59
AG5
G
213 221Right-handed alpha
Helix 60
AG6
G
228 243Right-handed alpha
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There are 8 sheets in PDB entry 7RHQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
353 357anti-parallel
Strand 3
A
143 152anti-parallel
Strand 4
A
349 351anti-parallel
Strand 5
A
333 334anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
353 357anti-parallel
Strand 3
A
143 152anti-parallel
Strand 4
A
407 412anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 182first strand
Strand 2
A
185 187anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
326 327anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
344 346anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
961 964first strand
Strand 2
A
794 797anti-parallel
Strand 3
A
997 1000anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 48first strand
Strand 2
C
172 174anti-parallel
Strand 3
C
181 184anti-parallel
Strand 4
C
145 150anti-parallel
Strand 5
C
122 126anti-parallel
Strand 6
C
84 86parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
C
97 98anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il