Analysis of interatomic Contacts of Structural Units in PDB entry:
7RIG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RIG entry

There are 4 chains in PDB entry 7RIG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2MET 1099
B
SER 2MET 1099
C
SER 2MET 1099
D
SER 2MET 1099
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are173 helices in PDB entry 7RIG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
40 47Right-handed alpha
Helix 3
AA3
A
48 51Right-handed 310
Helix 4
AA4
A
65 70Right-handed alpha
Helix 5
AA5
A
77 86Right-handed alpha
Helix 6
AA6
A
114 116Right-handed 310
Helix 7
AA7
A
139 143Right-handed 310
Helix 8
AA8
A
161 170Right-handed alpha
Helix 9
AA9
A
174 176Right-handed 310
Helix 10
AB1
A
177 195Right-handed alpha
Helix 11
AB2
A
225 234Right-handed alpha
Helix 12
AB3
A
247 258Right-handed alpha
Helix 13
AB4
A
281 295Right-handed alpha
Helix 14
AB5
A
312 328Right-handed alpha
Helix 15
AB6
A
349 363Right-handed alpha
Helix 16
AB7
A
365 370Right-handed alpha
Helix 17
AB8
A
383 399Right-handed alpha
Helix 18
AB9
A
412 419Right-handed alpha
Helix 19
AC1
A
505 519Right-handed alpha
Helix 20
AC2
A
555 563Right-handed alpha
Helix 21
AC3
A
574 586Right-handed alpha
Helix 22
AC4
A
602 617Right-handed alpha
Helix 23
AC5
A
642 649Right-handed alpha
Helix 24
AC6
A
663 678Right-handed alpha
Helix 25
AC7
A
696 706Right-handed alpha
Helix 26
AC8
A
723 733Right-handed alpha
Helix 27
AC9
A
746 750Right-handed 310
Helix 28
AD1
A
771 783Right-handed alpha
Helix 29
AD2
A
792 808Right-handed alpha
Helix 30
AD3
A
825 831Right-handed alpha
Helix 31
AD4
A
859 865Right-handed alpha
Helix 32
AD5
A
868 879Right-handed alpha
Helix 33
AD6
A
883 897Right-handed alpha
Helix 34
AD7
A
904 916Right-handed alpha
Helix 35
AD8
A
919 929Right-handed alpha
Helix 36
AD9
A
937 953Right-handed alpha
Helix 37
AE1
A
955 966Right-handed alpha
Helix 38
AE2
A
986 998Right-handed alpha
Helix 39
AE3
A
1001 1018Right-handed alpha
Helix 40
AE4
A
1024 1040Right-handed alpha
Helix 41
AE5
A
1044 1055Right-handed alpha
Helix 42
AE6
A
1055 1079Right-handed alpha
Helix 43
AE7
A
1087 1089Right-handed 310
Helix 44
AE8
B
7 19Right-handed alpha
Helix 45
AE9
B
40 47Right-handed alpha
Helix 46
AF1
B
48 51Right-handed 310
Helix 47
AF2
B
65 70Right-handed alpha
Helix 48
AF3
B
77 86Right-handed alpha
Helix 49
AF4
B
114 116Right-handed 310
Helix 50
AF5
B
139 143Right-handed 310
Helix 51
AF6
B
161 170Right-handed alpha
Helix 52
AF7
B
174 176Right-handed 310
Helix 53
AF8
B
177 195Right-handed alpha
Helix 54
AF9
B
225 234Right-handed alpha
Helix 55
AG1
B
247 258Right-handed alpha
Helix 56
AG2
B
281 295Right-handed alpha
Helix 57
AG3
B
312 328Right-handed alpha
Helix 58
AG4
B
349 363Right-handed alpha
Helix 59
AG5
B
365 370Right-handed alpha
Helix 60
AG6
B
383 399Right-handed alpha
Helix 61
AG7
B
412 419Right-handed alpha
Helix 62
AG8
B
505 519Right-handed alpha
Helix 63
AG9
B
555 563Right-handed alpha
Helix 64
AH1
B
574 586Right-handed alpha
Helix 65
AH2
B
602 617Right-handed alpha
Helix 66
AH3
B
642 649Right-handed alpha
Helix 67
AH4
B
663 678Right-handed alpha
Helix 68
AH5
B
696 706Right-handed alpha
Helix 69
AH6
B
723 733Right-handed alpha
Helix 70
AH7
B
746 750Right-handed 310
Helix 71
AH8
B
771 783Right-handed alpha
Helix 72
AH9
B
792 807Right-handed alpha
Helix 73
AI1
B
825 831Right-handed alpha
Helix 74
AI2
B
859 865Right-handed alpha
Helix 75
AI3
B
868 879Right-handed alpha
Helix 76
AI4
B
883 897Right-handed alpha
Helix 77
AI5
B
904 916Right-handed alpha
Helix 78
AI6
B
919 929Right-handed alpha
Helix 79
AI7
B
937 953Right-handed alpha
Helix 80
AI8
B
955 966Right-handed alpha
Helix 81
AI9
B
986 998Right-handed alpha
Helix 82
AJ1
B
1001 1018Right-handed alpha
Helix 83
AJ2
B
1024 1040Right-handed alpha
Helix 84
AJ3
B
1044 1055Right-handed alpha
Helix 85
AJ4
B
1055 1079Right-handed alpha
Helix 86
AJ5
B
1087 1089Right-handed 310
Helix 87
AJ6
C
7 19Right-handed alpha
Helix 88
AJ7
C
40 47Right-handed alpha
Helix 89
AJ8
C
48 51Right-handed 310
Helix 90
AJ9
C
65 70Right-handed alpha
Helix 91
AK1
C
77 86Right-handed alpha
Helix 92
AK2
C
114 116Right-handed 310
Helix 93
AK3
C
139 143Right-handed 310
Helix 94
AK4
C
144 149Right-handed alpha
Helix 95
AK5
C
161 170Right-handed alpha
Helix 96
AK6
C
174 176Right-handed 310
Helix 97
AK7
C
177 195Right-handed alpha
Helix 98
AK8
C
225 234Right-handed alpha
Helix 99
AK9
C
247 258Right-handed alpha
Helix 100
AL1
C
281 295Right-handed alpha
Helix 101
AL2
C
312 328Right-handed alpha
Helix 102
AL3
C
349 363Right-handed alpha
Helix 103
AL4
C
365 370Right-handed alpha
Helix 104
AL5
C
383 399Right-handed alpha
Helix 105
AL6
C
412 419Right-handed alpha
Helix 106
AL7
C
505 519Right-handed alpha
Helix 107
AL8
C
555 563Right-handed alpha
Helix 108
AL9
C
574 586Right-handed alpha
Helix 109
AM1
C
602 617Right-handed alpha
Helix 110
AM2
C
642 649Right-handed alpha
Helix 111
AM3
C
663 678Right-handed alpha
Helix 112
AM4
C
696 706Right-handed alpha
Helix 113
AM5
C
723 732Right-handed alpha
Helix 114
AM6
C
746 750Right-handed 310
Helix 115
AM7
C
771 783Right-handed alpha
Helix 116
AM8
C
792 807Right-handed alpha
Helix 117
AM9
C
825 831Right-handed alpha
Helix 118
AN1
C
859 865Right-handed alpha
Helix 119
AN2
C
868 879Right-handed alpha
Helix 120
AN3
C
883 897Right-handed alpha
Helix 121
AN4
C
904 916Right-handed alpha
Helix 122
AN5
C
919 929Right-handed alpha
Helix 123
AN6
C
937 953Right-handed alpha
Helix 124
AN7
C
955 966Right-handed alpha
Helix 125
AN8
C
986 998Right-handed alpha
Helix 126
AN9
C
1001 1018Right-handed alpha
Helix 127
AO1
C
1024 1040Right-handed alpha
Helix 128
AO2
C
1044 1055Right-handed alpha
Helix 129
AO3
C
1055 1079Right-handed alpha
Helix 130
AO4
C
1087 1089Right-handed 310
Helix 131
AO5
D
7 19Right-handed alpha
Helix 132
AO6
D
40 47Right-handed alpha
Helix 133
AO7
D
48 51Right-handed 310
Helix 134
AO8
D
65 70Right-handed alpha
Helix 135
AO9
D
77 86Right-handed alpha
Helix 136
AP1
D
114 116Right-handed 310
Helix 137
AP2
D
139 143Right-handed 310
Helix 138
AP3
D
161 170Right-handed alpha
Helix 139
AP4
D
174 176Right-handed 310
Helix 140
AP5
D
177 195Right-handed alpha
Helix 141
AP6
D
225 234Right-handed alpha
Helix 142
AP7
D
247 258Right-handed alpha
Helix 143
AP8
D
281 295Right-handed alpha
Helix 144
AP9
D
312 328Right-handed alpha
Helix 145
AQ1
D
349 363Right-handed alpha
Helix 146
AQ2
D
365 370Right-handed alpha
Helix 147
AQ3
D
383 399Right-handed alpha
Helix 148
AQ4
D
412 419Right-handed alpha
Helix 149
AQ5
D
505 519Right-handed alpha
Helix 150
AQ6
D
555 563Right-handed alpha
Helix 151
AQ7
D
574 586Right-handed alpha
Helix 152
AQ8
D
602 617Right-handed alpha
Helix 153
AQ9
D
642 649Right-handed alpha
Helix 154
AR1
D
663 678Right-handed alpha
Helix 155
AR2
D
696 706Right-handed alpha
Helix 156
AR3
D
723 732Right-handed alpha
Helix 157
AR4
D
746 750Right-handed 310
Helix 158
AR5
D
771 783Right-handed alpha
Helix 159
AR6
D
792 807Right-handed alpha
Helix 160
AR7
D
825 831Right-handed alpha
Helix 161
AR8
D
859 865Right-handed alpha
Helix 162
AR9
D
868 879Right-handed alpha
Helix 163
AS1
D
883 897Right-handed alpha
Helix 164
AS2
D
904 916Right-handed alpha
Helix 165
AS3
D
919 929Right-handed alpha
Helix 166
AS4
D
937 953Right-handed alpha
Helix 167
AS5
D
955 966Right-handed alpha
Helix 168
AS6
D
986 998Right-handed alpha
Helix 169
AS7
D
1001 1018Right-handed alpha
Helix 170
AS8
D
1024 1040Right-handed alpha
Helix 171
AS9
D
1044 1055Right-handed alpha
Helix 172
AT1
D
1055 1079Right-handed alpha
Helix 173
AT2
D
1087 1089Right-handed 310
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There are 40 sheets in PDB entry 7RIG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 6first strand
Strand 2
A
217 222anti-parallel
Strand 3
A
197 208anti-parallel
Strand 4
A
118 125anti-parallel
Strand 5
A
129 135anti-parallel
Strand 6
A
150 155anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 6first strand
Strand 2
A
217 222anti-parallel
Strand 3
A
197 208anti-parallel
Strand 4
A
211 214anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
32 34first strand
Strand 2
A
105 109anti-parallel
Strand 3
A
55 59anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
93 95first strand
Strand 2
A
98 100anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
263 268first strand
Strand 2
A
303 308anti-parallel
Strand 3
A
275 280parallel
Strand 4
A
336 344parallel
Strand 5
A
373 380parallel
Strand 6
A
402 405parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
537 543first strand
Strand 2
A
546 553anti-parallel
Strand 3
A
526 530parallel
Strand 4
A
498 502parallel
Strand 5
A
566 571parallel
Strand 6
A
593 596parallel
Strand 7
A
619 621parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
634 635first strand
Strand 2
A
628 630anti-parallel
Strand 3
A
681 686anti-parallel
Strand 4
A
657 661parallel
Strand 5
A
712 717parallel
Strand 6
A
740 744parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
823 824first strand
Strand 2
B
834 835parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
834 835first strand
Strand 2
B
823 824parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
840 842first strand
Strand 2
D
1091 1093parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
845 846first strand
Strand 2
A
853 854anti-parallel
Strand 3
A
857 858anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1091 1093first strand
Strand 2
D
840 842parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 6first strand
Strand 2
B
217 222anti-parallel
Strand 3
B
197 208anti-parallel
Strand 4
B
118 125anti-parallel
Strand 5
B
129 135anti-parallel
Strand 6
B
150 155anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 6first strand
Strand 2
B
217 222anti-parallel
Strand 3
B
197 208anti-parallel
Strand 4
B
211 214anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
32 34first strand
Strand 2
B
105 109anti-parallel
Strand 3
B
55 58anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
93 95first strand
Strand 2
B
98 100anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
263 268first strand
Strand 2
B
303 308anti-parallel
Strand 3
B
275 280parallel
Strand 4
B
336 344parallel
Strand 5
B
373 380parallel
Strand 6
B
402 403parallel
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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
537 543first strand
Strand 2
B
546 553anti-parallel
Strand 3
B
526 530parallel
Strand 4
B
498 502parallel
Strand 5
B
566 571parallel
Strand 6
B
593 596parallel
Strand 7
B
619 621parallel
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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
634 635first strand
Strand 2
B
628 630anti-parallel
Strand 3
B
681 686anti-parallel
Strand 4
B
657 661parallel
Strand 5
B
712 717parallel
Strand 6
B
740 744parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
840 842first strand
Strand 2
C
1091 1093parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
845 846first strand
Strand 2
B
853 854anti-parallel
Strand 3
B
857 858anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1091 1093first strand
Strand 2
C
840 842parallel
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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 6first strand
Strand 2
C
217 222anti-parallel
Strand 3
C
197 208anti-parallel
Strand 4
C
118 125anti-parallel
Strand 5
C
129 135anti-parallel
Strand 6
C
150 155anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 6first strand
Strand 2
C
217 222anti-parallel
Strand 3
C
197 208anti-parallel
Strand 4
C
211 214anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
32 34first strand
Strand 2
C
105 109anti-parallel
Strand 3
C
55 59anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
93 95first strand
Strand 2
C
98 100anti-parallel
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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
263 268first strand
Strand 2
C
303 308anti-parallel
Strand 3
C
275 280parallel
Strand 4
C
336 344parallel
Strand 5
C
373 380parallel
Strand 6
C
402 403parallel
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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
537 543first strand
Strand 2
C
546 553anti-parallel
Strand 3
C
526 530parallel
Strand 4
C
498 502parallel
Strand 5
C
566 571parallel
Strand 6
C
593 596parallel
Strand 7
C
619 621parallel
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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
634 635first strand
Strand 2
C
628 630anti-parallel
Strand 3
C
681 686anti-parallel
Strand 4
C
657 661parallel
Strand 5
C
712 717parallel
Strand 6
C
740 744parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
823 824first strand
Strand 2
D
834 835parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
834 835first strand
Strand 2
D
823 824parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
845 846first strand
Strand 2
C
853 854anti-parallel
Strand 3
C
857 858anti-parallel
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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 6first strand
Strand 2
D
218 222anti-parallel
Strand 3
D
197 208anti-parallel
Strand 4
D
118 125anti-parallel
Strand 5
D
129 135anti-parallel
Strand 6
D
150 155anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 6first strand
Strand 2
D
218 222anti-parallel
Strand 3
D
197 208anti-parallel
Strand 4
D
211 214anti-parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
32 34first strand
Strand 2
D
105 109anti-parallel
Strand 3
D
55 58anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
93 95first strand
Strand 2
D
98 100anti-parallel
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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
263 268first strand
Strand 2
D
303 308anti-parallel
Strand 3
D
275 280parallel
Strand 4
D
336 344parallel
Strand 5
D
373 380parallel
Strand 6
D
402 405parallel
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There are 7 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
537 543first strand
Strand 2
D
546 553anti-parallel
Strand 3
D
526 530parallel
Strand 4
D
498 502parallel
Strand 5
D
566 571parallel
Strand 6
D
593 596parallel
Strand 7
D
619 621parallel
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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
634 635first strand
Strand 2
D
628 630anti-parallel
Strand 3
D
681 686anti-parallel
Strand 4
D
657 661parallel
Strand 5
D
712 717parallel
Strand 6
D
740 744parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
845 846first strand
Strand 2
D
853 854anti-parallel
Strand 3
D
857 858anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il