Analysis of interatomic Contacts of Structural Units in PDB entry:
7RIT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RIT entry

There are 2 chains in PDB entry 7RIT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4PHE 572
B
 ASP 4PHE 572
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7RIT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
18 50Right-handed alpha
Helix 3
AA3
A
54 103Right-handed alpha
Helix 4
AA4
A
107 113Right-handed alpha
Helix 5
AA5
A
115 158Right-handed alpha
Helix 6
AA6
A
158 169Right-handed alpha
Helix 7
AA7
A
170 202Right-handed alpha
Helix 8
AA8
A
207 214Right-handed alpha
Helix 9
AA9
A
217 266Right-handed alpha
Helix 10
AB1
A
266 273Right-handed alpha
Helix 11
AB2
A
275 317Right-handed alpha
Helix 12
AB3
A
373 382Right-handed alpha
Helix 13
AB4
A
403 411Right-handed alpha
Helix 14
AB5
A
424 430Right-handed alpha
Helix 15
AB6
A
433 437Right-handed 310
Helix 16
AB7
A
438 448Right-handed alpha
Helix 17
AB8
A
460 464Right-handed 310
Helix 18
AB9
A
474 489Right-handed alpha
Helix 19
AC1
A
507 520Right-handed alpha
Helix 20
AC2
A
530 536Right-handed alpha
Helix 21
AC3
A
553 561Right-handed alpha
Helix 22
AC4
A
562 571Right-handed alpha
Helix 23
AC5
B
5 15Right-handed alpha
Helix 24
AC6
B
18 50Right-handed alpha
Helix 25
AC7
B
54 103Right-handed alpha
Helix 26
AC8
B
107 113Right-handed alpha
Helix 27
AC9
B
115 158Right-handed alpha
Helix 28
AD1
B
158 169Right-handed alpha
Helix 29
AD2
B
170 202Right-handed alpha
Helix 30
AD3
B
207 214Right-handed alpha
Helix 31
AD4
B
217 266Right-handed alpha
Helix 32
AD5
B
266 273Right-handed alpha
Helix 33
AD6
B
275 317Right-handed alpha
Helix 34
AD7
B
373 382Right-handed alpha
Helix 35
AD8
B
403 411Right-handed alpha
Helix 36
AD9
B
424 430Right-handed alpha
Helix 37
AE1
B
433 437Right-handed 310
Helix 38
AE2
B
438 448Right-handed alpha
Helix 39
AE3
B
460 464Right-handed 310
Helix 40
AE4
B
474 489Right-handed alpha
Helix 41
AE5
B
507 520Right-handed alpha
Helix 42
AE6
B
530 536Right-handed alpha
Helix 43
AE7
B
553 561Right-handed alpha
Helix 44
AE8
B
562 571Right-handed alpha
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There are 4 sheets in PDB entry 7RIT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 357first strand
Strand 2
A
335 337anti-parallel
Strand 3
A
393 394anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 368first strand
Strand 2
A
542 544parallel
Strand 3
A
547 548anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
356 357first strand
Strand 2
B
335 337anti-parallel
Strand 3
B
393 394anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 368first strand
Strand 2
B
542 544parallel
Strand 3
B
547 548anti-parallel
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