Analysis of interatomic Contacts of Structural Units in PDB entry:
7RK6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RK6 entry

There are 4 chains in PDB entry 7RK6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 15	GLN 1066
B	GLN 15	GLN 1066
C	GLN 15	GLN 1066
D	GLN 15	GLN 1066

There are180 helices in PDB entry 7RK6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	43	Right-handed alpha
Helix 2	AA2	A	87	92	Right-handed alpha
Helix 3	AA3	A	96	123	Right-handed alpha
Helix 4	AA4	A	136	160	Right-handed alpha
Helix 5	AA5	A	163	168	Right-handed alpha
Helix 6	AA6	A	169	177	Right-handed alpha
Helix 7	AA7	A	178	189	Right-handed alpha
Helix 8	AA8	A	195	204	Right-handed 310
Helix 9	AA9	A	205	213	Right-handed alpha
Helix 10	AB1	A	218	249	Right-handed alpha
Helix 11	AB2	A	250	254	Right-handed 310
Helix 12	AB3	A	262	275	Right-handed alpha
Helix 13	AB4	A	286	317	Right-handed alpha
Helix 14	AB5	A	341	353	Right-handed alpha
Helix 15	AB6	A	373	383	Right-handed alpha
Helix 16	AB7	A	396	403	Right-handed alpha
Helix 17	AB8	A	404	408	Right-handed 310
Helix 18	AB9	A	421	440	Right-handed alpha
Helix 19	AC1	A	452	461	Right-handed 310
Helix 20	AC2	A	465	469	Right-handed 310
Helix 21	AC3	A	475	489	Right-handed alpha
Helix 22	AC4	A	491	500	Right-handed alpha
Helix 23	AC5	A	512	523	Right-handed alpha
Helix 24	AC6	A	532	536	Right-handed 310
Helix 25	AC7	A	540	550	Right-handed alpha
Helix 26	AC8	A	592	597	Right-handed alpha
Helix 27	AC9	A	597	602	Right-handed alpha
Helix 28	AD1	A	612	616	Right-handed 310
Helix 29	AD2	A	721	725	Right-handed 310
Helix 30	AD3	A	728	735	Right-handed alpha
Helix 31	AD4	A	756	761	Right-handed alpha
Helix 32	AD5	A	762	765	Right-handed 310
Helix 33	AD6	A	769	773	Right-handed 310
Helix 34	AD7	A	781	793	Right-handed alpha
Helix 35	AD8	A	807	814	Right-handed alpha
Helix 36	AD9	A	834	838	Right-handed 310
Helix 37	AE1	A	839	851	Right-handed alpha
Helix 38	AE2	A	894	902	Right-handed 310
Helix 39	AE3	A	916	921	Right-handed alpha
Helix 40	AE4	A	927	940	Right-handed alpha
Helix 41	AE5	A	942	952	Right-handed alpha
Helix 42	AE6	A	956	965	Right-handed alpha
Helix 43	AE7	A	977	983	Right-handed 310
Helix 44	AE8	A	997	1002	Right-handed 310
Helix 45	AE9	A	1005	1018	Right-handed alpha
Helix 46	AF1	B	19	43	Right-handed alpha
Helix 47	AF2	B	87	92	Right-handed alpha
Helix 48	AF3	B	96	123	Right-handed alpha
Helix 49	AF4	B	136	160	Right-handed alpha
Helix 50	AF5	B	163	168	Right-handed alpha
Helix 51	AF6	B	169	177	Right-handed alpha
Helix 52	AF7	B	178	189	Right-handed alpha
Helix 53	AF8	B	195	204	Right-handed 310
Helix 54	AF9	B	205	213	Right-handed alpha
Helix 55	AG1	B	218	249	Right-handed alpha
Helix 56	AG2	B	250	254	Right-handed 310
Helix 57	AG3	B	262	275	Right-handed alpha
Helix 58	AG4	B	286	317	Right-handed alpha
Helix 59	AG5	B	341	353	Right-handed alpha
Helix 60	AG6	B	373	383	Right-handed alpha
Helix 61	AG7	B	396	403	Right-handed alpha
Helix 62	AG8	B	404	408	Right-handed 310
Helix 63	AG9	B	421	440	Right-handed alpha
Helix 64	AH1	B	452	461	Right-handed 310
Helix 65	AH2	B	465	469	Right-handed 310
Helix 66	AH3	B	475	489	Right-handed alpha
Helix 67	AH4	B	491	500	Right-handed alpha
Helix 68	AH5	B	512	523	Right-handed alpha
Helix 69	AH6	B	532	536	Right-handed 310
Helix 70	AH7	B	540	550	Right-handed alpha
Helix 71	AH8	B	592	597	Right-handed alpha
Helix 72	AH9	B	597	602	Right-handed alpha
Helix 73	AI1	B	612	616	Right-handed 310
Helix 74	AI2	B	721	725	Right-handed 310
Helix 75	AI3	B	728	735	Right-handed alpha
Helix 76	AI4	B	756	761	Right-handed alpha
Helix 77	AI5	B	762	765	Right-handed 310
Helix 78	AI6	B	769	773	Right-handed 310
Helix 79	AI7	B	781	793	Right-handed alpha
Helix 80	AI8	B	807	814	Right-handed alpha
Helix 81	AI9	B	834	838	Right-handed 310
Helix 82	AJ1	B	839	851	Right-handed alpha
Helix 83	AJ2	B	894	902	Right-handed 310
Helix 84	AJ3	B	916	921	Right-handed alpha
Helix 85	AJ4	B	927	940	Right-handed alpha
Helix 86	AJ5	B	942	952	Right-handed alpha
Helix 87	AJ6	B	956	965	Right-handed alpha
Helix 88	AJ7	B	977	983	Right-handed 310
Helix 89	AJ8	B	997	1002	Right-handed 310
Helix 90	AJ9	B	1005	1018	Right-handed alpha
Helix 91	AK1	C	19	43	Right-handed alpha
Helix 92	AK2	C	87	92	Right-handed alpha
Helix 93	AK3	C	96	123	Right-handed alpha
Helix 94	AK4	C	136	160	Right-handed alpha
Helix 95	AK5	C	163	168	Right-handed alpha
Helix 96	AK6	C	169	177	Right-handed alpha
Helix 97	AK7	C	178	189	Right-handed alpha
Helix 98	AK8	C	195	204	Right-handed 310
Helix 99	AK9	C	205	213	Right-handed alpha
Helix 100	AL1	C	218	249	Right-handed alpha
Helix 101	AL2	C	250	254	Right-handed 310
Helix 102	AL3	C	262	275	Right-handed alpha
Helix 103	AL4	C	286	317	Right-handed alpha
Helix 104	AL5	C	341	353	Right-handed alpha
Helix 105	AL6	C	373	383	Right-handed alpha
Helix 106	AL7	C	396	403	Right-handed alpha
Helix 107	AL8	C	404	408	Right-handed 310
Helix 108	AL9	C	421	440	Right-handed alpha
Helix 109	AM1	C	452	461	Right-handed 310
Helix 110	AM2	C	465	469	Right-handed 310
Helix 111	AM3	C	475	489	Right-handed alpha
Helix 112	AM4	C	491	500	Right-handed alpha
Helix 113	AM5	C	512	523	Right-handed alpha
Helix 114	AM6	C	532	536	Right-handed 310
Helix 115	AM7	C	540	550	Right-handed alpha
Helix 116	AM8	C	592	597	Right-handed alpha
Helix 117	AM9	C	597	602	Right-handed alpha
Helix 118	AN1	C	612	616	Right-handed 310
Helix 119	AN2	C	721	725	Right-handed 310
Helix 120	AN3	C	728	735	Right-handed alpha
Helix 121	AN4	C	756	761	Right-handed alpha
Helix 122	AN5	C	762	765	Right-handed 310
Helix 123	AN6	C	769	773	Right-handed 310
Helix 124	AN7	C	781	793	Right-handed alpha
Helix 125	AN8	C	807	814	Right-handed alpha
Helix 126	AN9	C	834	838	Right-handed 310
Helix 127	AO1	C	839	851	Right-handed alpha
Helix 128	AO2	C	894	902	Right-handed 310
Helix 129	AO3	C	916	921	Right-handed alpha
Helix 130	AO4	C	927	940	Right-handed alpha
Helix 131	AO5	C	942	952	Right-handed alpha
Helix 132	AO6	C	956	965	Right-handed alpha
Helix 133	AO7	C	977	983	Right-handed 310
Helix 134	AO8	C	997	1002	Right-handed 310
Helix 135	AO9	C	1005	1018	Right-handed alpha
Helix 136	AP1	D	19	43	Right-handed alpha
Helix 137	AP2	D	87	92	Right-handed alpha
Helix 138	AP3	D	96	123	Right-handed alpha
Helix 139	AP4	D	136	160	Right-handed alpha
Helix 140	AP5	D	163	168	Right-handed alpha
Helix 141	AP6	D	169	177	Right-handed alpha
Helix 142	AP7	D	178	189	Right-handed alpha
Helix 143	AP8	D	195	204	Right-handed 310
Helix 144	AP9	D	205	213	Right-handed alpha
Helix 145	AQ1	D	218	249	Right-handed alpha
Helix 146	AQ2	D	250	254	Right-handed 310
Helix 147	AQ3	D	262	275	Right-handed alpha
Helix 148	AQ4	D	286	317	Right-handed alpha
Helix 149	AQ5	D	341	353	Right-handed alpha
Helix 150	AQ6	D	373	383	Right-handed alpha
Helix 151	AQ7	D	396	403	Right-handed alpha
Helix 152	AQ8	D	404	408	Right-handed 310
Helix 153	AQ9	D	421	440	Right-handed alpha
Helix 154	AR1	D	452	461	Right-handed 310
Helix 155	AR2	D	465	469	Right-handed 310
Helix 156	AR3	D	475	489	Right-handed alpha
Helix 157	AR4	D	491	500	Right-handed alpha
Helix 158	AR5	D	512	523	Right-handed alpha
Helix 159	AR6	D	532	536	Right-handed 310
Helix 160	AR7	D	540	550	Right-handed alpha
Helix 161	AR8	D	592	597	Right-handed alpha
Helix 162	AR9	D	597	602	Right-handed alpha
Helix 163	AS1	D	612	616	Right-handed 310
Helix 164	AS2	D	721	725	Right-handed 310
Helix 165	AS3	D	728	735	Right-handed alpha
Helix 166	AS4	D	756	761	Right-handed alpha
Helix 167	AS5	D	762	765	Right-handed 310
Helix 168	AS6	D	769	773	Right-handed 310
Helix 169	AS7	D	781	793	Right-handed alpha
Helix 170	AS8	D	807	814	Right-handed alpha
Helix 171	AS9	D	834	838	Right-handed 310
Helix 172	AT1	D	839	851	Right-handed alpha
Helix 173	AT2	D	894	902	Right-handed 310
Helix 174	AT3	D	916	921	Right-handed alpha
Helix 175	AT4	D	927	940	Right-handed alpha
Helix 176	AT5	D	942	952	Right-handed alpha
Helix 177	AT6	D	956	965	Right-handed alpha
Helix 178	AT7	D	977	983	Right-handed 310
Helix 179	AT8	D	997	1002	Right-handed 310
Helix 180	AT9	D	1005	1018	Right-handed alpha

There are 20 sheets in PDB entry 7RK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	388	first strand
Strand 2	A	362	367	parallel
Strand 3	A	332	337	parallel
Strand 4	A	410	413	parallel
Strand 5	A	444	449	parallel
Strand 6	A	471	474	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	530	first strand
Strand 2	A	585	590	anti-parallel
Strand 3	A	554	559	anti-parallel
Strand 4	A	570	572	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	539	first strand
Strand 2	A	579	580	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	799	802	first strand
Strand 2	A	776	780	parallel
Strand 3	A	741	746	parallel
Strand 4	A	821	826	parallel
Strand 5	A	888	892	parallel
Strand 6	A	924	926	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	988	991	first strand
Strand 2	A	1058	1061	anti-parallel
Strand 3	A	1021	1027	anti-parallel
Strand 4	A	1041	1045	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	387	388	first strand
Strand 2	B	362	367	parallel
Strand 3	B	332	337	parallel
Strand 4	B	410	413	parallel
Strand 5	B	444	449	parallel
Strand 6	B	471	474	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	530	first strand
Strand 2	B	585	590	anti-parallel
Strand 3	B	554	559	anti-parallel
Strand 4	B	570	572	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	539	first strand
Strand 2	B	579	580	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	799	802	first strand
Strand 2	B	776	780	parallel
Strand 3	B	741	746	parallel
Strand 4	B	821	826	parallel
Strand 5	B	888	892	parallel
Strand 6	B	924	926	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	988	991	first strand
Strand 2	B	1058	1061	anti-parallel
Strand 3	B	1021	1027	anti-parallel
Strand 4	B	1041	1045	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	387	388	first strand
Strand 2	C	362	367	parallel
Strand 3	C	332	337	parallel
Strand 4	C	410	413	parallel
Strand 5	C	444	449	parallel
Strand 6	C	471	474	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	530	first strand
Strand 2	C	585	590	anti-parallel
Strand 3	C	554	559	anti-parallel
Strand 4	C	570	572	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	539	first strand
Strand 2	C	579	580	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	799	802	first strand
Strand 2	C	776	780	parallel
Strand 3	C	741	746	parallel
Strand 4	C	821	826	parallel
Strand 5	C	888	892	parallel
Strand 6	C	924	926	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	988	991	first strand
Strand 2	C	1058	1061	anti-parallel
Strand 3	C	1021	1027	anti-parallel
Strand 4	C	1041	1045	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	387	388	first strand
Strand 2	D	362	367	parallel
Strand 3	D	332	337	parallel
Strand 4	D	410	413	parallel
Strand 5	D	444	449	parallel
Strand 6	D	471	474	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	525	530	first strand
Strand 2	D	585	590	anti-parallel
Strand 3	D	554	559	anti-parallel
Strand 4	D	570	572	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	539	first strand
Strand 2	D	579	580	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	799	802	first strand
Strand 2	D	776	780	parallel
Strand 3	D	741	746	parallel
Strand 4	D	821	826	parallel
Strand 5	D	888	892	parallel
Strand 6	D	924	926	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	988	991	first strand
Strand 2	D	1058	1061	anti-parallel
Strand 3	D	1021	1027	anti-parallel
Strand 4	D	1041	1045	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RK6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RK6