Analysis of interatomic Contacts of Structural Units in PDB entry:
7RKZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RKZ entry

There are 4 chains in PDB entry 7RKZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	MET 1099
B	SER 2	MET 1099
C	SER 2	MET 1099
D	SER 2	GLU 1097

There are171 helices in PDB entry 7RKZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	18	Right-handed alpha
Helix 2	AA2	A	39	47	Right-handed alpha
Helix 3	AA3	A	48	52	Right-handed 310
Helix 4	AA4	A	65	69	Right-handed 310
Helix 5	AA5	A	77	86	Right-handed alpha
Helix 6	AA6	A	138	142	Right-handed 310
Helix 7	AA7	A	161	168	Right-handed alpha
Helix 8	AA8	A	174	195	Right-handed alpha
Helix 9	AA9	A	224	228	Right-handed 310
Helix 10	AB1	A	229	234	Right-handed alpha
Helix 11	AB2	A	247	260	Right-handed alpha
Helix 12	AB3	A	281	295	Right-handed alpha
Helix 13	AB4	A	312	328	Right-handed alpha
Helix 14	AB5	A	349	364	Right-handed alpha
Helix 15	AB6	A	365	370	Right-handed alpha
Helix 16	AB7	A	384	399	Right-handed alpha
Helix 17	AB8	A	412	419	Right-handed alpha
Helix 18	AB9	A	505	519	Right-handed alpha
Helix 19	AC1	A	555	563	Right-handed alpha
Helix 20	AC2	A	577	587	Right-handed alpha
Helix 21	AC3	A	602	617	Right-handed alpha
Helix 22	AC4	A	642	649	Right-handed alpha
Helix 23	AC5	A	663	678	Right-handed alpha
Helix 24	AC6	A	696	707	Right-handed alpha
Helix 25	AC7	A	722	732	Right-handed alpha
Helix 26	AC8	A	746	750	Right-handed 310
Helix 27	AC9	A	767	770	Right-handed 310
Helix 28	AD1	A	771	781	Right-handed alpha
Helix 29	AD2	A	792	808	Right-handed alpha
Helix 30	AD3	A	825	832	Right-handed alpha
Helix 31	AD4	A	859	865	Right-handed alpha
Helix 32	AD5	A	868	879	Right-handed alpha
Helix 33	AD6	A	883	897	Right-handed alpha
Helix 34	AD7	A	904	916	Right-handed alpha
Helix 35	AD8	A	919	929	Right-handed alpha
Helix 36	AD9	A	937	952	Right-handed alpha
Helix 37	AE1	A	955	967	Right-handed alpha
Helix 38	AE2	A	984	998	Right-handed alpha
Helix 39	AE3	A	1001	1018	Right-handed alpha
Helix 40	AE4	A	1024	1040	Right-handed alpha
Helix 41	AE5	A	1044	1055	Right-handed alpha
Helix 42	AE6	A	1055	1079	Right-handed alpha
Helix 43	AE7	A	1087	1089	Right-handed 310
Helix 44	AE8	B	7	19	Right-handed alpha
Helix 45	AE9	B	40	47	Right-handed alpha
Helix 46	AF1	B	48	52	Right-handed 310
Helix 47	AF2	B	77	85	Right-handed alpha
Helix 48	AF3	B	138	142	Right-handed 310
Helix 49	AF4	B	161	169	Right-handed alpha
Helix 50	AF5	B	174	195	Right-handed alpha
Helix 51	AF6	B	224	228	Right-handed 310
Helix 52	AF7	B	229	234	Right-handed alpha
Helix 53	AF8	B	247	260	Right-handed alpha
Helix 54	AF9	B	281	295	Right-handed alpha
Helix 55	AG1	B	312	328	Right-handed alpha
Helix 56	AG2	B	349	364	Right-handed alpha
Helix 57	AG3	B	365	370	Right-handed alpha
Helix 58	AG4	B	384	399	Right-handed alpha
Helix 59	AG5	B	412	419	Right-handed alpha
Helix 60	AG6	B	505	519	Right-handed alpha
Helix 61	AG7	B	555	563	Right-handed alpha
Helix 62	AG8	B	577	587	Right-handed alpha
Helix 63	AG9	B	602	617	Right-handed alpha
Helix 64	AH1	B	642	649	Right-handed alpha
Helix 65	AH2	B	663	678	Right-handed alpha
Helix 66	AH3	B	696	706	Right-handed alpha
Helix 67	AH4	B	722	733	Right-handed alpha
Helix 68	AH5	B	767	770	Right-handed 310
Helix 69	AH6	B	771	783	Right-handed alpha
Helix 70	AH7	B	789	791	Right-handed 310
Helix 71	AH8	B	792	808	Right-handed alpha
Helix 72	AH9	B	825	831	Right-handed alpha
Helix 73	AI1	B	858	865	Right-handed alpha
Helix 74	AI2	B	868	879	Right-handed alpha
Helix 75	AI3	B	883	897	Right-handed alpha
Helix 76	AI4	B	904	916	Right-handed alpha
Helix 77	AI5	B	919	929	Right-handed alpha
Helix 78	AI6	B	937	952	Right-handed alpha
Helix 79	AI7	B	955	966	Right-handed alpha
Helix 80	AI8	B	984	998	Right-handed alpha
Helix 81	AI9	B	1001	1018	Right-handed alpha
Helix 82	AJ1	B	1024	1040	Right-handed alpha
Helix 83	AJ2	B	1044	1055	Right-handed alpha
Helix 84	AJ3	B	1055	1080	Right-handed alpha
Helix 85	AJ4	B	1087	1089	Right-handed 310
Helix 86	AJ5	C	7	19	Right-handed alpha
Helix 87	AJ6	C	39	47	Right-handed alpha
Helix 88	AJ7	C	48	52	Right-handed 310
Helix 89	AJ8	C	66	70	Right-handed 310
Helix 90	AJ9	C	77	86	Right-handed alpha
Helix 91	AK1	C	114	116	Right-handed 310
Helix 92	AK2	C	138	142	Right-handed 310
Helix 93	AK3	C	161	169	Right-handed alpha
Helix 94	AK4	C	174	195	Right-handed alpha
Helix 95	AK5	C	225	230	Right-handed alpha
Helix 96	AK6	C	249	258	Right-handed alpha
Helix 97	AK7	C	281	295	Right-handed alpha
Helix 98	AK8	C	312	328	Right-handed alpha
Helix 99	AK9	C	349	364	Right-handed alpha
Helix 100	AL1	C	365	370	Right-handed alpha
Helix 101	AL2	C	384	399	Right-handed alpha
Helix 102	AL3	C	412	419	Right-handed alpha
Helix 103	AL4	C	505	519	Right-handed alpha
Helix 104	AL5	C	555	563	Right-handed alpha
Helix 105	AL6	C	577	586	Right-handed alpha
Helix 106	AL7	C	602	617	Right-handed alpha
Helix 107	AL8	C	642	649	Right-handed alpha
Helix 108	AL9	C	664	678	Right-handed alpha
Helix 109	AM1	C	696	706	Right-handed alpha
Helix 110	AM2	C	722	733	Right-handed alpha
Helix 111	AM3	C	746	752	Right-handed 310
Helix 112	AM4	C	767	770	Right-handed 310
Helix 113	AM5	C	771	781	Right-handed alpha
Helix 114	AM6	C	792	808	Right-handed alpha
Helix 115	AM7	C	825	831	Right-handed alpha
Helix 116	AM8	C	859	865	Right-handed alpha
Helix 117	AM9	C	868	879	Right-handed alpha
Helix 118	AN1	C	883	897	Right-handed alpha
Helix 119	AN2	C	904	916	Right-handed alpha
Helix 120	AN3	C	919	929	Right-handed alpha
Helix 121	AN4	C	937	952	Right-handed alpha
Helix 122	AN5	C	955	966	Right-handed alpha
Helix 123	AN6	C	984	998	Right-handed alpha
Helix 124	AN7	C	1001	1018	Right-handed alpha
Helix 125	AN8	C	1024	1039	Right-handed alpha
Helix 126	AN9	C	1044	1054	Right-handed alpha
Helix 127	AO1	C	1055	1079	Right-handed alpha
Helix 128	AO2	C	1087	1089	Right-handed 310
Helix 129	AO3	D	7	19	Right-handed alpha
Helix 130	AO4	D	39	47	Right-handed alpha
Helix 131	AO5	D	48	52	Right-handed 310
Helix 132	AO6	D	65	70	Right-handed alpha
Helix 133	AO7	D	77	85	Right-handed alpha
Helix 134	AO8	D	138	142	Right-handed 310
Helix 135	AO9	D	161	168	Right-handed alpha
Helix 136	AP1	D	174	195	Right-handed alpha
Helix 137	AP2	D	224	228	Right-handed 310
Helix 138	AP3	D	229	234	Right-handed alpha
Helix 139	AP4	D	249	257	Right-handed alpha
Helix 140	AP5	D	281	293	Right-handed alpha
Helix 141	AP6	D	312	329	Right-handed alpha
Helix 142	AP7	D	349	364	Right-handed alpha
Helix 143	AP8	D	365	371	Right-handed 310
Helix 144	AP9	D	384	399	Right-handed alpha
Helix 145	AQ1	D	413	420	Right-handed alpha
Helix 146	AQ2	D	505	519	Right-handed alpha
Helix 147	AQ3	D	555	563	Right-handed alpha
Helix 148	AQ4	D	577	587	Right-handed alpha
Helix 149	AQ5	D	602	617	Right-handed alpha
Helix 150	AQ6	D	642	649	Right-handed alpha
Helix 151	AQ7	D	663	678	Right-handed alpha
Helix 152	AQ8	D	696	707	Right-handed alpha
Helix 153	AQ9	D	722	733	Right-handed alpha
Helix 154	AR1	D	747	752	Right-handed alpha
Helix 155	AR2	D	773	781	Right-handed alpha
Helix 156	AR3	D	789	791	Right-handed 310
Helix 157	AR4	D	792	807	Right-handed alpha
Helix 158	AR5	D	825	832	Right-handed alpha
Helix 159	AR6	D	858	865	Right-handed alpha
Helix 160	AR7	D	868	879	Right-handed alpha
Helix 161	AR8	D	883	897	Right-handed alpha
Helix 162	AR9	D	904	916	Right-handed alpha
Helix 163	AS1	D	919	929	Right-handed alpha
Helix 164	AS2	D	937	953	Right-handed alpha
Helix 165	AS3	D	955	966	Right-handed alpha
Helix 166	AS4	D	984	998	Right-handed alpha
Helix 167	AS5	D	1001	1018	Right-handed alpha
Helix 168	AS6	D	1024	1040	Right-handed alpha
Helix 169	AS7	D	1044	1055	Right-handed alpha
Helix 170	AS8	D	1055	1079	Right-handed alpha
Helix 171	AS9	D	1087	1089	Right-handed 310

There are 40 sheets in PDB entry 7RKZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	6	first strand
Strand 2	A	217	222	anti-parallel
Strand 3	A	197	208	anti-parallel
Strand 4	A	119	126	anti-parallel
Strand 5	A	129	135	anti-parallel
Strand 6	A	150	155	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	6	first strand
Strand 2	A	217	222	anti-parallel
Strand 3	A	197	208	anti-parallel
Strand 4	A	211	214	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	34	first strand
Strand 2	A	105	109	anti-parallel
Strand 3	A	55	59	anti-parallel
Strand 4	A	73	76	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	268	first strand
Strand 2	A	303	308	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	336	340	parallel
Strand 3	A	373	378	parallel
Strand 4	A	402	405	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	543	first strand
Strand 2	A	546	553	anti-parallel
Strand 3	A	526	530	parallel
Strand 4	A	498	502	parallel
Strand 5	A	566	571	parallel
Strand 6	A	593	596	parallel
Strand 7	A	619	621	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	634	635	first strand
Strand 2	A	628	630	anti-parallel
Strand 3	A	681	686	anti-parallel
Strand 4	A	657	661	parallel
Strand 5	A	712	717	parallel
Strand 6	A	740	744	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	823	824	first strand
Strand 2	B	834	835	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	834	835	first strand
Strand 2	B	823	824	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	840	842	first strand
Strand 2	D	1091	1093	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	845	846	first strand
Strand 2	A	853	854	anti-parallel
Strand 3	A	857	858	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1091	1093	first strand
Strand 2	D	840	842	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	6	first strand
Strand 2	B	217	222	anti-parallel
Strand 3	B	197	207	anti-parallel
Strand 4	B	118	126	anti-parallel
Strand 5	B	129	135	anti-parallel
Strand 6	B	153	155	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	6	first strand
Strand 2	B	217	222	anti-parallel
Strand 3	B	197	207	anti-parallel
Strand 4	B	212	214	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	34	first strand
Strand 2	B	105	109	anti-parallel
Strand 3	B	55	59	anti-parallel
Strand 4	B	73	76	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	268	first strand
Strand 2	B	303	308	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	277	first strand
Strand 2	B	336	340	parallel
Strand 3	B	373	378	parallel
Strand 4	B	402	405	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	543	first strand
Strand 2	B	546	553	anti-parallel
Strand 3	B	526	530	parallel
Strand 4	B	498	502	parallel
Strand 5	B	566	571	parallel
Strand 6	B	593	596	parallel
Strand 7	B	619	621	parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	634	635	first strand
Strand 2	B	628	630	anti-parallel
Strand 3	B	681	686	anti-parallel
Strand 4	B	657	661	parallel
Strand 5	B	712	717	parallel
Strand 6	B	740	744	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	840	842	first strand
Strand 2	C	1091	1093	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	845	846	first strand
Strand 2	B	853	854	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1091	1093	first strand
Strand 2	C	840	842	parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	6	first strand
Strand 2	C	217	222	anti-parallel
Strand 3	C	197	207	anti-parallel
Strand 4	C	118	126	anti-parallel
Strand 5	C	129	135	anti-parallel
Strand 6	C	150	154	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	6	first strand
Strand 2	C	217	222	anti-parallel
Strand 3	C	197	207	anti-parallel
Strand 4	C	212	214	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	34	first strand
Strand 2	C	105	109	anti-parallel
Strand 3	C	55	59	anti-parallel
Strand 4	C	73	76	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	268	first strand
Strand 2	C	303	308	anti-parallel
Strand 3	C	279	280	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	277	first strand
Strand 2	C	336	340	parallel
Strand 3	C	373	378	parallel
Strand 4	C	402	405	parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	537	543	first strand
Strand 2	C	546	553	anti-parallel
Strand 3	C	526	530	parallel
Strand 4	C	499	502	parallel
Strand 5	C	568	571	parallel
Strand 6	C	593	596	parallel
Strand 7	C	619	621	parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	634	635	first strand
Strand 2	C	628	630	anti-parallel
Strand 3	C	681	686	anti-parallel
Strand 4	C	657	661	parallel
Strand 5	C	712	717	parallel
Strand 6	C	740	744	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	823	824	first strand
Strand 2	D	834	835	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	834	835	first strand
Strand 2	D	823	824	parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	845	846	first strand
Strand 2	C	853	854	anti-parallel
Strand 3	C	857	858	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	5	first strand
Strand 2	D	217	222	anti-parallel
Strand 3	D	197	207	anti-parallel
Strand 4	D	118	126	anti-parallel
Strand 5	D	129	135	anti-parallel
Strand 6	D	153	155	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	5	first strand
Strand 2	D	217	222	anti-parallel
Strand 3	D	197	207	anti-parallel
Strand 4	D	212	214	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	34	first strand
Strand 2	D	105	109	anti-parallel
Strand 3	D	55	59	anti-parallel
Strand 4	D	73	76	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	268	first strand
Strand 2	D	303	308	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	336	340	first strand
Strand 2	D	373	378	parallel
Strand 3	D	402	405	parallel

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There are 7 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	537	543	first strand
Strand 2	D	546	553	anti-parallel
Strand 3	D	526	530	parallel
Strand 4	D	498	502	parallel
Strand 5	D	566	571	parallel
Strand 6	D	593	596	parallel
Strand 7	D	619	621	parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	634	635	first strand
Strand 2	D	628	630	anti-parallel
Strand 3	D	681	686	anti-parallel
Strand 4	D	657	661	parallel
Strand 5	D	712	717	parallel
Strand 6	D	740	744	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	845	846	first strand
Strand 2	D	853	854	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 7RKZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RKZ