Analysis of interatomic Contacts of Structural Units in PDB entry:
7RL9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RL9 entry

There are 6 chains in PDB entry 7RL9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 12	SER 775
B	LEU 12	SER 775
C	LEU 12	SER 775
D	LEU 12	SER 775
E	LEU 12	SER 775
F	LEU 12	SER 775

There are192 helices in PDB entry 7RL9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	49	Right-handed alpha
Helix 2	AA2	A	85	90	Right-handed 310
Helix 3	AA3	A	135	139	Right-handed 310
Helix 4	AA4	A	190	200	Right-handed alpha
Helix 5	AA5	A	209	226	Right-handed alpha
Helix 6	AA6	A	250	263	Right-handed alpha
Helix 7	AA7	A	270	276	Right-handed alpha
Helix 8	AA8	A	280	296	Right-handed alpha
Helix 9	AA9	A	320	334	Right-handed alpha
Helix 10	AB1	A	354	359	Right-handed 310
Helix 11	AB2	A	373	385	Right-handed alpha
Helix 12	AB3	A	396	403	Right-handed alpha
Helix 13	AB4	A	407	427	Right-handed alpha
Helix 14	AB5	A	438	443	Right-handed alpha
Helix 15	AB6	A	448	459	Right-handed alpha
Helix 16	AB7	A	475	479	Right-handed 310
Helix 17	AB8	A	482	491	Right-handed alpha
Helix 18	AB9	A	494	499	Right-handed alpha
Helix 19	AC1	A	499	507	Right-handed alpha
Helix 20	AC2	A	523	536	Right-handed alpha
Helix 21	AC3	A	543	553	Right-handed alpha
Helix 22	AC4	A	558	569	Right-handed alpha
Helix 23	AC5	A	580	586	Right-handed alpha
Helix 24	AC6	A	598	610	Right-handed alpha
Helix 25	AC7	A	625	629	Right-handed 310
Helix 26	AC8	A	630	634	Right-handed 310
Helix 27	AC9	A	649	661	Right-handed alpha
Helix 28	AD1	A	671	679	Right-handed alpha
Helix 29	AD2	A	683	707	Right-handed alpha
Helix 30	AD3	A	732	740	Right-handed alpha
Helix 31	AD4	A	741	743	Right-handed 310
Helix 32	AD5	A	749	764	Right-handed alpha
Helix 33	AD6	B	42	49	Right-handed alpha
Helix 34	AD7	B	85	90	Right-handed 310
Helix 35	AD8	B	135	139	Right-handed 310
Helix 36	AD9	B	190	200	Right-handed alpha
Helix 37	AE1	B	209	226	Right-handed alpha
Helix 38	AE2	B	250	263	Right-handed alpha
Helix 39	AE3	B	270	276	Right-handed alpha
Helix 40	AE4	B	280	296	Right-handed alpha
Helix 41	AE5	B	320	334	Right-handed alpha
Helix 42	AE6	B	354	359	Right-handed 310
Helix 43	AE7	B	373	385	Right-handed alpha
Helix 44	AE8	B	396	403	Right-handed alpha
Helix 45	AE9	B	407	427	Right-handed alpha
Helix 46	AF1	B	438	443	Right-handed alpha
Helix 47	AF2	B	448	459	Right-handed alpha
Helix 48	AF3	B	475	479	Right-handed 310
Helix 49	AF4	B	482	491	Right-handed alpha
Helix 50	AF5	B	494	499	Right-handed alpha
Helix 51	AF6	B	499	507	Right-handed alpha
Helix 52	AF7	B	523	536	Right-handed alpha
Helix 53	AF8	B	543	553	Right-handed alpha
Helix 54	AF9	B	558	569	Right-handed alpha
Helix 55	AG1	B	580	586	Right-handed alpha
Helix 56	AG2	B	598	610	Right-handed alpha
Helix 57	AG3	B	625	629	Right-handed 310
Helix 58	AG4	B	630	634	Right-handed 310
Helix 59	AG5	B	649	661	Right-handed alpha
Helix 60	AG6	B	671	679	Right-handed alpha
Helix 61	AG7	B	683	707	Right-handed alpha
Helix 62	AG8	B	732	740	Right-handed alpha
Helix 63	AG9	B	741	743	Right-handed 310
Helix 64	AH1	B	749	764	Right-handed alpha
Helix 65	AH2	C	42	49	Right-handed alpha
Helix 66	AH3	C	85	90	Right-handed 310
Helix 67	AH4	C	135	139	Right-handed 310
Helix 68	AH5	C	190	200	Right-handed alpha
Helix 69	AH6	C	209	226	Right-handed alpha
Helix 70	AH7	C	250	263	Right-handed alpha
Helix 71	AH8	C	270	276	Right-handed alpha
Helix 72	AH9	C	280	296	Right-handed alpha
Helix 73	AI1	C	320	334	Right-handed alpha
Helix 74	AI2	C	354	359	Right-handed 310
Helix 75	AI3	C	373	385	Right-handed alpha
Helix 76	AI4	C	396	403	Right-handed alpha
Helix 77	AI5	C	407	427	Right-handed alpha
Helix 78	AI6	C	438	443	Right-handed alpha
Helix 79	AI7	C	448	459	Right-handed alpha
Helix 80	AI8	C	475	479	Right-handed 310
Helix 81	AI9	C	482	491	Right-handed alpha
Helix 82	AJ1	C	494	499	Right-handed alpha
Helix 83	AJ2	C	499	507	Right-handed alpha
Helix 84	AJ3	C	523	536	Right-handed alpha
Helix 85	AJ4	C	543	553	Right-handed alpha
Helix 86	AJ5	C	558	569	Right-handed alpha
Helix 87	AJ6	C	580	586	Right-handed alpha
Helix 88	AJ7	C	598	610	Right-handed alpha
Helix 89	AJ8	C	625	629	Right-handed 310
Helix 90	AJ9	C	630	634	Right-handed 310
Helix 91	AK1	C	649	661	Right-handed alpha
Helix 92	AK2	C	671	679	Right-handed alpha
Helix 93	AK3	C	683	707	Right-handed alpha
Helix 94	AK4	C	732	740	Right-handed alpha
Helix 95	AK5	C	741	743	Right-handed 310
Helix 96	AK6	C	749	764	Right-handed alpha
Helix 97	AK7	D	42	49	Right-handed alpha
Helix 98	AK8	D	85	90	Right-handed 310
Helix 99	AK9	D	135	139	Right-handed 310
Helix 100	AL1	D	190	200	Right-handed alpha
Helix 101	AL2	D	209	226	Right-handed alpha
Helix 102	AL3	D	250	263	Right-handed alpha
Helix 103	AL4	D	270	276	Right-handed alpha
Helix 104	AL5	D	280	296	Right-handed alpha
Helix 105	AL6	D	320	334	Right-handed alpha
Helix 106	AL7	D	354	359	Right-handed 310
Helix 107	AL8	D	373	385	Right-handed alpha
Helix 108	AL9	D	396	403	Right-handed alpha
Helix 109	AM1	D	407	427	Right-handed alpha
Helix 110	AM2	D	438	443	Right-handed alpha
Helix 111	AM3	D	448	459	Right-handed alpha
Helix 112	AM4	D	475	479	Right-handed 310
Helix 113	AM5	D	482	491	Right-handed alpha
Helix 114	AM6	D	494	499	Right-handed alpha
Helix 115	AM7	D	499	507	Right-handed alpha
Helix 116	AM8	D	523	536	Right-handed alpha
Helix 117	AM9	D	543	553	Right-handed alpha
Helix 118	AN1	D	558	569	Right-handed alpha
Helix 119	AN2	D	580	586	Right-handed alpha
Helix 120	AN3	D	598	610	Right-handed alpha
Helix 121	AN4	D	625	629	Right-handed 310
Helix 122	AN5	D	630	634	Right-handed 310
Helix 123	AN6	D	649	661	Right-handed alpha
Helix 124	AN7	D	671	679	Right-handed alpha
Helix 125	AN8	D	683	707	Right-handed alpha
Helix 126	AN9	D	732	740	Right-handed alpha
Helix 127	AO1	D	741	743	Right-handed 310
Helix 128	AO2	D	749	764	Right-handed alpha
Helix 129	AO3	E	42	49	Right-handed alpha
Helix 130	AO4	E	85	90	Right-handed 310
Helix 131	AO5	E	135	139	Right-handed 310
Helix 132	AO6	E	190	200	Right-handed alpha
Helix 133	AO7	E	209	226	Right-handed alpha
Helix 134	AO8	E	250	263	Right-handed alpha
Helix 135	AO9	E	270	276	Right-handed alpha
Helix 136	AP1	E	280	296	Right-handed alpha
Helix 137	AP2	E	320	334	Right-handed alpha
Helix 138	AP3	E	354	359	Right-handed 310
Helix 139	AP4	E	373	385	Right-handed alpha
Helix 140	AP5	E	396	403	Right-handed alpha
Helix 141	AP6	E	407	427	Right-handed alpha
Helix 142	AP7	E	438	443	Right-handed alpha
Helix 143	AP8	E	448	459	Right-handed alpha
Helix 144	AP9	E	475	479	Right-handed 310
Helix 145	AQ1	E	482	491	Right-handed alpha
Helix 146	AQ2	E	494	499	Right-handed alpha
Helix 147	AQ3	E	499	507	Right-handed alpha
Helix 148	AQ4	E	523	536	Right-handed alpha
Helix 149	AQ5	E	543	553	Right-handed alpha
Helix 150	AQ6	E	558	569	Right-handed alpha
Helix 151	AQ7	E	580	586	Right-handed alpha
Helix 152	AQ8	E	598	610	Right-handed alpha
Helix 153	AQ9	E	625	629	Right-handed 310
Helix 154	AR1	E	630	634	Right-handed 310
Helix 155	AR2	E	649	661	Right-handed alpha
Helix 156	AR3	E	671	679	Right-handed alpha
Helix 157	AR4	E	683	707	Right-handed alpha
Helix 158	AR5	E	732	740	Right-handed alpha
Helix 159	AR6	E	741	743	Right-handed 310
Helix 160	AR7	E	749	764	Right-handed alpha
Helix 161	AR8	F	42	49	Right-handed alpha
Helix 162	AR9	F	85	90	Right-handed 310
Helix 163	AS1	F	135	139	Right-handed 310
Helix 164	AS2	F	190	200	Right-handed alpha
Helix 165	AS3	F	209	226	Right-handed alpha
Helix 166	AS4	F	250	263	Right-handed alpha
Helix 167	AS5	F	270	276	Right-handed alpha
Helix 168	AS6	F	280	296	Right-handed alpha
Helix 169	AS7	F	320	334	Right-handed alpha
Helix 170	AS8	F	354	359	Right-handed 310
Helix 171	AS9	F	373	385	Right-handed alpha
Helix 172	AT1	F	396	403	Right-handed alpha
Helix 173	AT2	F	407	427	Right-handed alpha
Helix 174	AT3	F	438	443	Right-handed alpha
Helix 175	AT4	F	448	459	Right-handed alpha
Helix 176	AT5	F	475	479	Right-handed 310
Helix 177	AT6	F	482	491	Right-handed alpha
Helix 178	AT7	F	494	499	Right-handed alpha
Helix 179	AT8	F	499	507	Right-handed alpha
Helix 180	AT9	F	523	536	Right-handed alpha
Helix 181	AU1	F	543	553	Right-handed alpha
Helix 182	AU2	F	558	569	Right-handed alpha
Helix 183	AU3	F	580	586	Right-handed alpha
Helix 184	AU4	F	598	610	Right-handed alpha
Helix 185	AU5	F	625	629	Right-handed 310
Helix 186	AU6	F	630	634	Right-handed 310
Helix 187	AU7	F	649	661	Right-handed alpha
Helix 188	AU8	F	671	679	Right-handed alpha
Helix 189	AU9	F	683	707	Right-handed alpha
Helix 190	AV1	F	732	740	Right-handed alpha
Helix 191	AV2	F	741	743	Right-handed 310
Helix 192	AV3	F	749	764	Right-handed alpha

There are 18 sheets in PDB entry 7RL9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	60	first strand
Strand 2	A	101	103	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	269	first strand
Strand 2	A	299	303	parallel
Strand 3	A	341	346	parallel
Strand 4	A	240	243	parallel
Strand 5	A	365	367	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	542	first strand
Strand 2	A	572	576	parallel
Strand 3	A	617	623	parallel
Strand 4	A	513	517	parallel
Strand 5	A	641	644	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	60	first strand
Strand 2	B	101	103	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	269	first strand
Strand 2	B	299	303	parallel
Strand 3	B	341	346	parallel
Strand 4	B	240	243	parallel
Strand 5	B	365	367	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	572	576	parallel
Strand 3	B	617	623	parallel
Strand 4	B	513	517	parallel
Strand 5	B	641	644	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	101	103	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	269	first strand
Strand 2	C	299	303	parallel
Strand 3	C	341	346	parallel
Strand 4	C	240	243	parallel
Strand 5	C	365	367	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	542	first strand
Strand 2	C	572	576	parallel
Strand 3	C	617	623	parallel
Strand 4	C	513	517	parallel
Strand 5	C	641	644	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	101	103	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	269	first strand
Strand 2	D	299	303	parallel
Strand 3	D	341	346	parallel
Strand 4	D	240	243	parallel
Strand 5	D	365	367	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	542	first strand
Strand 2	D	572	576	parallel
Strand 3	D	617	623	parallel
Strand 4	D	513	517	parallel
Strand 5	D	641	644	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	60	first strand
Strand 2	E	101	103	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	269	first strand
Strand 2	E	299	303	parallel
Strand 3	E	341	346	parallel
Strand 4	E	240	243	parallel
Strand 5	E	365	367	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	538	542	first strand
Strand 2	E	572	576	parallel
Strand 3	E	617	623	parallel
Strand 4	E	513	517	parallel
Strand 5	E	641	644	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	101	103	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	265	269	first strand
Strand 2	F	299	303	parallel
Strand 3	F	341	346	parallel
Strand 4	F	240	243	parallel
Strand 5	F	365	367	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	538	542	first strand
Strand 2	F	572	576	parallel
Strand 3	F	617	623	parallel
Strand 4	F	513	517	parallel
Strand 5	F	641	644	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RL9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RL9