Analysis of interatomic Contacts of Structural Units in PDB entry:
7RMH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RMH entry

There are 6 chains in PDB entry 7RMH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 14	LEU 394
B	LEU 14	ASN 340
G	ARG 13	LEU 50
N	GLN 1	VAL 126
R	ASN 23	PHE 320
S	ARG 1	MET 11

There are 28 helices in PDB entry 7RMH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	38	Right-handed alpha
Helix 2	AA2	A	52	61	Right-handed alpha
Helix 3	AA3	A	233	238	Right-handed 310
Helix 4	AA4	A	265	278	Right-handed alpha
Helix 5	AA5	A	294	303	Right-handed alpha
Helix 6	AA6	A	332	351	Right-handed alpha
Helix 7	AA7	A	370	391	Right-handed alpha
Helix 8	AA8	B	15	25	Right-handed alpha
Helix 9	AA9	B	30	34	Right-handed 310
Helix 10	AB1	G	14	23	Right-handed alpha
Helix 11	AB2	G	29	44	Right-handed alpha
Helix 12	AB3	G	45	48	Right-handed 310
Helix 13	AB4	N	28	32	Right-handed 310
Helix 14	AB5	N	87	91	Right-handed 310
Helix 15	AB6	R	28	60	Right-handed alpha
Helix 16	AB7	R	65	67	Right-handed 310
Helix 17	AB8	R	68	85	Right-handed alpha
Helix 18	AB9	R	86	94	Right-handed alpha
Helix 19	AC1	R	101	135	Right-handed alpha
Helix 20	AC2	R	143	168	Right-handed alpha
Helix 21	AC3	R	191	205	Right-handed alpha
Helix 22	AC4	R	205	224	Right-handed alpha
Helix 23	AC5	R	240	270	Right-handed alpha
Helix 24	AC6	R	271	273	Right-handed 310
Helix 25	AC7	R	274	279	Right-handed 310
Helix 26	AC8	R	280	296	Right-handed alpha
Helix 27	AC9	R	299	309	Right-handed alpha
Helix 28	AD1	R	309	320	Right-handed alpha

There are 11 sheets in PDB entry 7RMH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	214	first strand
Strand 2	A	217	224	anti-parallel
Strand 3	A	40	46	parallel
Strand 4	A	243	249	parallel
Strand 5	A	286	292	parallel
Strand 6	A	359	363	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	336	340	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	89	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	166	170	anti-parallel
Strand 4	B	176	180	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	249	254	anti-parallel
Strand 4	B	260	265	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	304	308	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	7	first strand
Strand 2	N	19	25	anti-parallel
Strand 3	N	78	83	anti-parallel
Strand 4	N	68	73	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	58	60	first strand
Strand 2	N	45	51	anti-parallel
Strand 3	N	34	39	anti-parallel
Strand 4	N	92	98	anti-parallel
Strand 5	N	122	124	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	169	174	first strand
Strand 2	R	177	182	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RMH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RMH