Analysis of interatomic Contacts of Structural Units in PDB entry:
7ROM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ROM entry

There is 1 chain in PDB entry 7ROM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 30PHE 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7ROM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
116 124Right-handed alpha
Helix 2
AA2
A
157 171Right-handed alpha
Helix 3
AA3
A
186 190Right-handed 310
Helix 4
AA4
A
192 203Right-handed alpha
Helix 5
AA5
A
229 237Right-handed alpha
Helix 6
AA6
A
252 266Right-handed alpha
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There are 2 sheets in PDB entry 7ROM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 92first strand
Strand 2
A
76 83anti-parallel
Strand 3
A
129 136anti-parallel
Strand 4
A
41 52anti-parallel
Strand 5
A
55 61anti-parallel
Strand 6
A
104 110anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
207 213parallel
Strand 3
A
177 184parallel
Strand 4
A
148 154parallel
Strand 5
A
245 250parallel
Strand 6
A
281 283parallel
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