Analysis of interatomic Contacts of Structural Units in PDB entry:
7ROQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ROQ entry

There is 1 chain in PDB entry 7ROQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 3PHE 2220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 7ROQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 20Right-handed alpha
Helix 2
AA2
A
23 46Right-handed alpha
Helix 3
AA3
A
65 75Right-handed alpha
Helix 4
AA4
A
86 90Right-handed 310
Helix 5
AA5
A
100 118Right-handed alpha
Helix 6
AA6
A
120 136Right-handed alpha
Helix 7
AA7
A
199 210Right-handed alpha
Helix 8
AA8
A
215 227Right-handed alpha
Helix 9
AA9
A
228 230Right-handed 310
Helix 10
AB1
A
231 242Right-handed alpha
Helix 11
AB2
A
252 275Right-handed alpha
Helix 12
AB3
A
277 287Right-handed alpha
Helix 13
AB4
A
288 290Right-handed 310
Helix 14
AB5
A
298 309Right-handed alpha
Helix 15
AB6
A
353 365Right-handed alpha
Helix 16
AB7
A
368 381Right-handed alpha
Helix 17
AB8
A
389 405Right-handed alpha
Helix 18
AB9
A
406 408Right-handed 310
Helix 19
AC1
A
409 427Right-handed alpha
Helix 20
AC2
A
430 441Right-handed alpha
Helix 21
AC3
A
442 448Right-handed alpha
Helix 22
AC4
A
448 457Right-handed alpha
Helix 23
AC5
A
461 468Right-handed alpha
Helix 24
AC6
A
483 503Right-handed alpha
Helix 25
AC7
A
515 528Right-handed alpha
Helix 26
AC8
A
559 563Right-handed 310
Helix 27
AC9
A
592 609Right-handed alpha
Helix 28
AD1
A
630 638Right-handed alpha
Helix 29
AD2
A
639 665Right-handed alpha
Helix 30
AD3
A
666 674Right-handed alpha
Helix 31
AD4
A
677 706Right-handed alpha
Helix 32
AD5
A
714 738Right-handed alpha
Helix 33
AD6
A
742 768Right-handed alpha
Helix 34
AD7
A
773 782Right-handed alpha
Helix 35
AD8
A
782 800Right-handed alpha
Helix 36
AD9
A
820 845Right-handed alpha
Helix 37
AE1
A
940 947Right-handed alpha
Helix 38
AE2
A
989 1002Right-handed alpha
Helix 39
AE3
A
1004 1020Right-handed alpha
Helix 40
AE4
A
1029 1033Right-handed 310
Helix 41
AE5
A
1034 1048Right-handed alpha
Helix 42
AE6
A
1049 1051Right-handed 310
Helix 43
AE7
A
1064 1078Right-handed alpha
Helix 44
AE8
A
1091 1097Right-handed alpha
Helix 45
AE9
A
1114 1123Right-handed alpha
Helix 46
AF1
A
1179 1191Right-handed alpha
Helix 47
AF2
A
1214 1228Right-handed alpha
Helix 48
AF3
A
1243 1252Right-handed alpha
Helix 49
AF4
A
1323 1343Right-handed alpha
Helix 50
AF5
A
1348 1366Right-handed alpha
Helix 51
AF6
A
1400 1408Right-handed alpha
Helix 52
AF7
A
1444 1452Right-handed alpha
Helix 53
AF8
A
1504 1523Right-handed alpha
Helix 54
AF9
A
1547 1561Right-handed alpha
Helix 55
AG1
A
1569 1583Right-handed alpha
Helix 56
AG2
A
1600 1618Right-handed alpha
Helix 57
AG3
A
1639 1668Right-handed alpha
Helix 58
AG4
A
1668 1681Right-handed alpha
Helix 59
AG5
A
1684 1691Right-handed alpha
Helix 60
AG6
A
1694 1721Right-handed alpha
Helix 61
AG7
A
1734 1754Right-handed alpha
Helix 62
AG8
A
1755 1758Right-handed 310
Helix 63
AG9
A
1765 1779Right-handed alpha
Helix 64
AH1
A
1800 1809Right-handed alpha
Helix 65
AH2
A
1814 1838Right-handed alpha
Helix 66
AH3
A
1850 1860Right-handed alpha
Helix 67
AH4
A
1860 1874Right-handed alpha
Helix 68
AH5
A
2002 2015Right-handed alpha
Helix 69
AH6
A
2017 2019Right-handed 310
Helix 70
AH7
A
2020 2032Right-handed alpha
Helix 71
AH8
A
2034 2038Right-handed 310
Helix 72
AH9
A
2041 2045Right-handed 310
Helix 73
AI1
A
2046 2060Right-handed alpha
Helix 74
AI2
A
2079 2094Right-handed alpha
Helix 75
AI3
A
2103 2111Right-handed alpha
Helix 76
AI4
A
2127 2135Right-handed alpha
Helix 77
AI5
A
2151 2163Right-handed alpha
Helix 78
AI6
A
2187 2197Right-handed alpha
Helix 79
AI7
A
2212 2220Right-handed alpha
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There are 10 sheets in PDB entry 7ROQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
628 629anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
617 621anti-parallel
Strand 3
A
1590 1594parallel
Strand 4
A
1533 1536anti-parallel
Strand 5
A
1391 1392parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
165 167anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 538first strand
Strand 2
A
552 557anti-parallel
Strand 3
A
1629 1633parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
919 924first strand
Strand 2
A
897 904anti-parallel
Strand 3
A
958 959anti-parallel
Strand 4
A
962 963anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
975 978first strand
Strand 2
A
1053 1056parallel
Strand 3
A
1084 1087parallel
Strand 4
A
929 932parallel
Strand 5
A
1100 1105parallel
Strand 6
A
1108 1113anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1195 1200first strand
Strand 2
A
1203 1208anti-parallel
Strand 3
A
1126 1131anti-parallel
Strand 4
A
1237 1240anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1489 1491first strand
Strand 2
A
1496 1498anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2066 2069first strand
Strand 2
A
2097 2100parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2167 2172first strand
Strand 2
A
2175 2180anti-parallel
Strand 3
A
2139 2144anti-parallel
Strand 4
A
2205 2209anti-parallel
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