Analysis of interatomic Contacts of Structural Units in PDB entry:
7RPJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RPJ entry

There is 1 chain in PDB entry 7RPJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 174PHE 1143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7RPJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
179 187Right-handed alpha
Helix 2
AA2
A
187 209Right-handed alpha
Helix 3
AA3
A
227 243Right-handed alpha
Helix 4
AA4
A
255 263Right-handed alpha
Helix 5
AA5
A
314 329Right-handed alpha
Helix 6
AA6
A
334 339Right-handed alpha
Helix 7
AA7
A
352 361Right-handed alpha
Helix 8
AA8
A
365 369Right-handed 310
Helix 9
AA9
A
370 391Right-handed alpha
Helix 10
AB1
A
414 419Right-handed 310
Helix 11
AB2
A
421 430Right-handed alpha
Helix 12
AB3
A
460 462Right-handed 310
Helix 13
AB4
A
463 471Right-handed alpha
Helix 14
AB5
A
494 503Right-handed alpha
Helix 15
AB6
A
503 522Right-handed alpha
Helix 16
AB7
A
524 547Right-handed alpha
Helix 17
AB8
A
556 587Right-handed alpha
Helix 18
AB9
A
591 621Right-handed alpha
Helix 19
AC1
A
622 624Right-handed 310
Helix 20
AC2
A
626 662Right-handed alpha
Helix 21
AC3
A
663 665Right-handed 310
Helix 22
AC4
A
682 706Right-handed alpha
Helix 23
AC5
A
706 715Right-handed alpha
Helix 24
AC6
A
715 736Right-handed alpha
Helix 25
AC7
A
746 750Right-handed 310
Helix 26
AC8
A
757 765Right-handed alpha
Helix 27
AC9
A
766 769Right-handed 310
Helix 28
AD1
A
770 777Right-handed alpha
Helix 29
AD2
A
818 835Right-handed alpha
Helix 30
AD3
A
849 861Right-handed alpha
Helix 31
AD4
A
880 895Right-handed alpha
Helix 32
AD5
A
934 954Right-handed alpha
Helix 33
AD6
A
959 963Right-handed 310
Helix 34
AD7
A
969 1002Right-handed alpha
Helix 35
AD8
A
1003 1028Right-handed alpha
Helix 36
AD9
A
1033 1061Right-handed alpha
Helix 37
AE1
A
1065 1095Right-handed alpha
Helix 38
AE2
A
1100 1123Right-handed alpha
Helix 39
AE3
A
1123 1133Right-handed alpha
Helix 40
AE4
A
1136 1140Right-handed 310
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There are 2 sheets in PDB entry 7RPJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
451 458first strand
Strand 2
A
299 305anti-parallel
Strand 3
A
482 487anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
909 912first strand
Strand 2
A
918 930anti-parallel
Strand 3
A
782 789anti-parallel
Strand 4
A
964 966anti-parallel
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