Analysis of interatomic Contacts of Structural Units in PDB entry:
7RPN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RPN entry

There is 1 chain in PDB entry 7RPN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7RPN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 30Right-handed alpha
Helix 2
AA2
A
44 46Right-handed 310
Helix 3
AA3
A
47 52Right-handed alpha
Helix 4
AA4
A
53 55Right-handed 310
Helix 5
AA5
A
80 87Right-handed alpha
Helix 6
AA6
A
96 103Right-handed alpha
Helix 7
AA7
A
106 120Right-handed alpha
Helix 8
AA8
A
131 137Right-handed alpha
Helix 9
AA9
A
139 148Right-handed alpha
Helix 10
AB1
A
149 151Right-handed 310
Helix 11
AB2
A
155 160Right-handed alpha
Helix 12
AB3
A
168 172Right-handed 310
Helix 13
AB4
A
179 199Right-handed alpha
Helix 14
AB5
A
199 206Right-handed alpha
Helix 15
AB6
A
215 224Right-handed alpha
Helix 16
AB7
A
234 238Right-handed 310
Helix 17
AB8
A
239 248Right-handed alpha
Helix 18
AB9
A
249 251Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7RPN.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
38 42parallel
Strand 3
A
60 64parallel
Strand 4
A
91 94parallel
Strand 5
A
123 128parallel
Strand 6
A
163 166parallel
Strand 7
A
208 210parallel
Strand 8
A
230 233parallel
Strand 9
A
5 9parallel
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