Analysis of interatomic Contacts of Structural Units in PDB entry:
7RPV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RPV entry

There are 8 chains in PDB entry 7RPV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 19	ASP 615
E	ASN 334	GLY 526
B	SER 19	ASP 615
F	ASN 334	CYS 525
C	SER 19	TYR 613
G	LEU 335	CYS 525
D	SER 19	ALA 614
H	LEU 335	GLY 526

There are144 helices in PDB entry 7RPV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	53	Right-handed alpha
Helix 2	AA2	A	55	83	Right-handed alpha
Helix 3	AA3	A	90	102	Right-handed alpha
Helix 4	AA4	A	103	107	Right-handed 310
Helix 5	AA5	A	110	130	Right-handed alpha
Helix 6	AA6	A	145	155	Right-handed alpha
Helix 7	AA7	A	157	188	Right-handed alpha
Helix 8	AA8	A	189	191	Right-handed 310
Helix 9	AA9	A	198	205	Right-handed alpha
Helix 10	AB1	A	218	252	Right-handed alpha
Helix 11	AB2	A	274	280	Right-handed 310
Helix 12	AB3	A	293	301	Right-handed alpha
Helix 13	AB4	A	303	319	Right-handed alpha
Helix 14	AB5	A	324	331	Right-handed alpha
Helix 15	AB6	A	365	385	Right-handed alpha
Helix 16	AB7	A	389	393	Right-handed 310
Helix 17	AB8	A	397	413	Right-handed alpha
Helix 18	AB9	A	414	421	Right-handed alpha
Helix 19	AC1	A	431	447	Right-handed alpha
Helix 20	AC2	A	448	466	Right-handed alpha
Helix 21	AC3	A	469	473	Right-handed 310
Helix 22	AC4	A	474	484	Right-handed alpha
Helix 23	AC5	A	499	502	Right-handed 310
Helix 24	AC6	A	503	508	Right-handed alpha
Helix 25	AC7	A	513	533	Right-handed alpha
Helix 26	AC8	A	538	542	Right-handed 310
Helix 27	AC9	A	547	559	Right-handed alpha
Helix 28	AD1	A	565	574	Right-handed alpha
Helix 29	AD2	A	581	599	Right-handed alpha
Helix 30	AD3	E	337	343	Right-handed alpha
Helix 31	AD4	E	349	353	Right-handed 310
Helix 32	AD5	E	365	370	Right-handed alpha
Helix 33	AD6	E	383	388	Right-handed alpha
Helix 34	AD7	E	406	410	Right-handed 310
Helix 35	AD8	E	415	422	Right-handed alpha
Helix 36	AD9	E	438	443	Right-handed alpha
Helix 37	AE1	E	502	505	Right-handed 310
Helix 38	AE2	B	20	51	Right-handed alpha
Helix 39	AE3	B	55	83	Right-handed alpha
Helix 40	AE4	B	90	102	Right-handed alpha
Helix 41	AE5	B	103	107	Right-handed 310
Helix 42	AE6	B	109	130	Right-handed alpha
Helix 43	AE7	B	148	155	Right-handed alpha
Helix 44	AE8	B	157	171	Right-handed alpha
Helix 45	AE9	B	171	194	Right-handed alpha
Helix 46	AF1	B	198	205	Right-handed alpha
Helix 47	AF2	B	206	208	Right-handed 310
Helix 48	AF3	B	218	252	Right-handed alpha
Helix 49	AF4	B	265	267	Right-handed 310
Helix 50	AF5	B	275	280	Right-handed 310
Helix 51	AF6	B	293	300	Right-handed alpha
Helix 52	AF7	B	303	318	Right-handed alpha
Helix 53	AF8	B	324	331	Right-handed alpha
Helix 54	AF9	B	365	385	Right-handed alpha
Helix 55	AG1	B	389	393	Right-handed 310
Helix 56	AG2	B	397	412	Right-handed alpha
Helix 57	AG3	B	414	420	Right-handed alpha
Helix 58	AG4	B	433	447	Right-handed alpha
Helix 59	AG5	B	448	466	Right-handed alpha
Helix 60	AG6	B	469	471	Right-handed 310
Helix 61	AG7	B	472	484	Right-handed alpha
Helix 62	AG8	B	499	502	Right-handed 310
Helix 63	AG9	B	503	508	Right-handed alpha
Helix 64	AH1	B	513	533	Right-handed alpha
Helix 65	AH2	B	547	561	Right-handed alpha
Helix 66	AH3	B	565	574	Right-handed alpha
Helix 67	AH4	B	581	599	Right-handed alpha
Helix 68	AH5	F	337	343	Right-handed alpha
Helix 69	AH6	F	349	353	Right-handed 310
Helix 70	AH7	F	364	371	Right-handed alpha
Helix 71	AH8	F	383	390	Right-handed alpha
Helix 72	AH9	F	404	408	Right-handed alpha
Helix 73	AI1	F	416	422	Right-handed alpha
Helix 74	AI2	F	438	443	Right-handed alpha
Helix 75	AI3	F	502	505	Right-handed 310
Helix 76	AI4	C	20	53	Right-handed alpha
Helix 77	AI5	C	55	82	Right-handed alpha
Helix 78	AI6	C	90	102	Right-handed alpha
Helix 79	AI7	C	103	108	Right-handed 310
Helix 80	AI8	C	109	130	Right-handed alpha
Helix 81	AI9	C	146	155	Right-handed alpha
Helix 82	AJ1	C	157	193	Right-handed alpha
Helix 83	AJ2	C	198	204	Right-handed alpha
Helix 84	AJ3	C	205	208	Right-handed 310
Helix 85	AJ4	C	218	252	Right-handed alpha
Helix 86	AJ5	C	265	267	Right-handed 310
Helix 87	AJ6	C	274	279	Right-handed 310
Helix 88	AJ7	C	293	300	Right-handed alpha
Helix 89	AJ8	C	303	318	Right-handed alpha
Helix 90	AJ9	C	324	331	Right-handed alpha
Helix 91	AK1	C	365	385	Right-handed alpha
Helix 92	AK2	C	389	393	Right-handed 310
Helix 93	AK3	C	397	413	Right-handed alpha
Helix 94	AK4	C	414	422	Right-handed alpha
Helix 95	AK5	C	431	447	Right-handed alpha
Helix 96	AK6	C	448	465	Right-handed alpha
Helix 97	AK7	C	469	471	Right-handed 310
Helix 98	AK8	C	472	484	Right-handed alpha
Helix 99	AK9	C	498	502	Right-handed 310
Helix 100	AL1	C	503	508	Right-handed alpha
Helix 101	AL2	C	512	533	Right-handed alpha
Helix 102	AL3	C	538	542	Right-handed 310
Helix 103	AL4	C	547	561	Right-handed alpha
Helix 104	AL5	C	565	574	Right-handed alpha
Helix 105	AL6	C	581	599	Right-handed alpha
Helix 106	AL7	G	337	343	Right-handed alpha
Helix 107	AL8	G	365	370	Right-handed alpha
Helix 108	AL9	G	383	388	Right-handed 310
Helix 109	AM1	G	406	410	Right-handed 310
Helix 110	AM2	G	416	422	Right-handed alpha
Helix 111	AM3	D	20	53	Right-handed alpha
Helix 112	AM4	D	55	82	Right-handed alpha
Helix 113	AM5	D	83	88	Right-handed 310
Helix 114	AM6	D	90	102	Right-handed alpha
Helix 115	AM7	D	109	130	Right-handed alpha
Helix 116	AM8	D	148	155	Right-handed alpha
Helix 117	AM9	D	157	193	Right-handed alpha
Helix 118	AN1	D	198	204	Right-handed alpha
Helix 119	AN2	D	205	208	Right-handed 310
Helix 120	AN3	D	220	252	Right-handed alpha
Helix 121	AN4	D	265	267	Right-handed 310
Helix 122	AN5	D	275	277	Right-handed 310
Helix 123	AN6	D	278	283	Right-handed alpha
Helix 124	AN7	D	293	300	Right-handed alpha
Helix 125	AN8	D	303	318	Right-handed alpha
Helix 126	AN9	D	324	331	Right-handed alpha
Helix 127	AO1	D	365	385	Right-handed alpha
Helix 128	AO2	D	389	393	Right-handed 310
Helix 129	AO3	D	397	413	Right-handed alpha
Helix 130	AO4	D	414	422	Right-handed alpha
Helix 131	AO5	D	431	465	Right-handed alpha
Helix 132	AO6	D	472	484	Right-handed alpha
Helix 133	AO7	D	498	502	Right-handed 310
Helix 134	AO8	D	503	508	Right-handed alpha
Helix 135	AO9	D	512	533	Right-handed alpha
Helix 136	AP1	D	538	542	Right-handed 310
Helix 137	AP2	D	547	559	Right-handed alpha
Helix 138	AP3	D	565	572	Right-handed alpha
Helix 139	AP4	D	581	599	Right-handed alpha
Helix 140	AP5	H	337	343	Right-handed alpha
Helix 141	AP6	H	364	370	Right-handed alpha
Helix 142	AP7	H	405	410	Right-handed 310
Helix 143	AP8	H	416	422	Right-handed alpha
Helix 144	AP9	H	438	443	Right-handed alpha

There are 24 sheets in PDB entry 7RPV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	133	first strand
Strand 2	A	141	143	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	487	488	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	352	first strand
Strand 2	A	355	356	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	354	358	first strand
Strand 2	E	395	403	anti-parallel
Strand 3	E	507	515	anti-parallel
Strand 4	E	431	437	anti-parallel
Strand 5	E	376	379	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	452	454	first strand
Strand 2	E	492	494	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	473	474	first strand
Strand 2	E	488	489	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	133	first strand
Strand 2	B	141	143	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	263	first strand
Strand 2	B	487	488	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	352	first strand
Strand 2	B	355	359	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	354	356	first strand
Strand 2	F	397	403	anti-parallel
Strand 3	F	507	513	anti-parallel
Strand 4	F	432	437	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	361	362	first strand
Strand 2	F	524	525	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	452	454	first strand
Strand 2	F	492	494	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	473	474	first strand
Strand 2	F	488	489	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	141	143	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	332	334	first strand
Strand 2	C	356	362	parallel
Strand 3	C	347	350	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	354	355	first strand
Strand 2	G	398	403	anti-parallel
Strand 3	G	507	514	anti-parallel
Strand 4	G	431	437	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	452	454	first strand
Strand 2	G	492	494	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	473	474	first strand
Strand 2	G	488	489	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	134	first strand
Strand 2	D	137	142	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	352	first strand
Strand 2	D	355	359	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	354	357	first strand
Strand 2	H	396	403	anti-parallel
Strand 3	H	507	514	anti-parallel
Strand 4	H	431	437	anti-parallel
Strand 5	H	376	380	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	452	454	first strand
Strand 2	H	492	494	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RPV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RPV