Analysis of interatomic Contacts of Structural Units in PDB entry:
7RPY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RPY entry

There is 1 chain in PDB entry 7RPY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 492THR 732
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 7RPY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
501 506Right-handed alpha
Helix 2
AA2
A
516 520Right-handed 310
Helix 3
AA3
A
557 561Right-handed 310
Helix 4
AA4
A
624 628Right-handed 310
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There are 6 sheets in PDB entry 7RPY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 500first strand
Strand 2
A
538 549anti-parallel
Strand 3
A
552 556anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 500first strand
Strand 2
A
538 549anti-parallel
Strand 3
A
565 569anti-parallel
Strand 4
A
593 595anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
522 524first strand
Strand 2
A
527 535anti-parallel
Strand 3
A
573 579anti-parallel
Strand 4
A
586 589anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
614 619first strand
Strand 2
A
604 611anti-parallel
Strand 3
A
652 657anti-parallel
Strand 4
A
688 689anti-parallel
Strand 5
A
671 672parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
614 619first strand
Strand 2
A
604 611anti-parallel
Strand 3
A
652 657anti-parallel
Strand 4
A
664 666anti-parallel
Strand 5
A
682 683anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
630 633first strand
Strand 2
A
636 645anti-parallel
Strand 3
A
702 710anti-parallel
Strand 4
A
723 730anti-parallel
Strand 5
A
679 680anti-parallel
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