Analysis of interatomic Contacts of Structural Units in PDB entry:
7RR8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RR8 entry

There are 3 chains in PDB entry 7RR8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 1034
C	MET 1	SER 1034
B	MET 1	SER 1034

There are123 helices in PDB entry 7RR8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	29	Right-handed alpha
Helix 2	AA2	A	53	61	Right-handed alpha
Helix 3	AA3	A	61	67	Right-handed alpha
Helix 4	AA4	A	99	115	Right-handed alpha
Helix 5	AA5	A	116	118	Right-handed 310
Helix 6	AA6	A	119	126	Right-handed alpha
Helix 7	AA7	A	150	162	Right-handed alpha
Helix 8	AA8	A	163	168	Right-handed alpha
Helix 9	AA9	A	189	196	Right-handed alpha
Helix 10	AB1	A	199	211	Right-handed alpha
Helix 11	AB2	A	242	248	Right-handed alpha
Helix 12	AB3	A	262	265	Right-handed alpha
Helix 13	AB4	A	298	314	Right-handed alpha
Helix 14	AB5	A	315	317	Right-handed 310
Helix 15	AB6	A	329	359	Right-handed alpha
Helix 16	AB7	A	361	386	Right-handed alpha
Helix 17	AB8	A	391	424	Right-handed alpha
Helix 18	AB9	A	426	435	Right-handed alpha
Helix 19	AC1	A	439	452	Right-handed alpha
Helix 20	AC2	A	453	458	Right-handed alpha
Helix 21	AC3	A	461	487	Right-handed alpha
Helix 22	AC4	A	487	496	Right-handed alpha
Helix 23	AC5	A	511	537	Right-handed alpha
Helix 24	AC6	A	541	559	Right-handed alpha
Helix 25	AC7	A	583	601	Right-handed alpha
Helix 26	AC8	A	639	643	Right-handed 310
Helix 27	AC9	A	649	657	Right-handed alpha
Helix 28	AD1	A	691	707	Right-handed alpha
Helix 29	AD2	A	732	740	Right-handed alpha
Helix 30	AD3	A	742	756	Right-handed alpha
Helix 31	AD4	A	777	780	Right-handed 310
Helix 32	AD5	A	782	788	Right-handed 310
Helix 33	AD6	A	836	850	Right-handed alpha
Helix 34	AD7	A	861	866	Right-handed alpha
Helix 35	AD8	A	874	893	Right-handed alpha
Helix 36	AD9	A	896	903	Right-handed alpha
Helix 37	AE1	A	905	919	Right-handed alpha
Helix 38	AE2	A	924	954	Right-handed alpha
Helix 39	AE3	A	959	991	Right-handed alpha
Helix 40	AE4	A	996	1032	Right-handed alpha
Helix 41	AE5	C	2	8	Right-handed alpha
Helix 42	AE6	C	8	29	Right-handed alpha
Helix 43	AE7	C	53	67	Right-handed alpha
Helix 44	AE8	C	99	115	Right-handed alpha
Helix 45	AE9	C	116	118	Right-handed 310
Helix 46	AF1	C	119	124	Right-handed alpha
Helix 47	AF2	C	150	162	Right-handed alpha
Helix 48	AF3	C	162	168	Right-handed alpha
Helix 49	AF4	C	189	196	Right-handed alpha
Helix 50	AF5	C	199	211	Right-handed alpha
Helix 51	AF6	C	242	248	Right-handed alpha
Helix 52	AF7	C	262	265	Right-handed alpha
Helix 53	AF8	C	298	313	Right-handed alpha
Helix 54	AF9	C	314	317	Right-handed 310
Helix 55	AG1	C	329	359	Right-handed alpha
Helix 56	AG2	C	361	386	Right-handed alpha
Helix 57	AG3	C	391	423	Right-handed alpha
Helix 58	AG4	C	428	439	Right-handed alpha
Helix 59	AG5	C	440	452	Right-handed alpha
Helix 60	AG6	C	454	459	Right-handed 310
Helix 61	AG7	C	460	497	Right-handed alpha
Helix 62	AG8	C	511	537	Right-handed alpha
Helix 63	AG9	C	539	559	Right-handed alpha
Helix 64	AH1	C	583	601	Right-handed alpha
Helix 65	AH2	C	643	656	Right-handed alpha
Helix 66	AH3	C	691	696	Right-handed alpha
Helix 67	AH4	C	698	703	Right-handed alpha
Helix 68	AH5	C	705	709	Right-handed 310
Helix 69	AH6	C	732	740	Right-handed alpha
Helix 70	AH7	C	742	755	Right-handed alpha
Helix 71	AH8	C	777	780	Right-handed 310
Helix 72	AH9	C	782	788	Right-handed 310
Helix 73	AI1	C	802	805	Right-handed 310
Helix 74	AI2	C	838	850	Right-handed alpha
Helix 75	AI3	C	860	893	Right-handed alpha
Helix 76	AI4	C	895	902	Right-handed alpha
Helix 77	AI5	C	904	919	Right-handed alpha
Helix 78	AI6	C	924	955	Right-handed alpha
Helix 79	AI7	C	959	992	Right-handed alpha
Helix 80	AI8	C	996	1033	Right-handed alpha
Helix 81	AI9	B	2	8	Right-handed alpha
Helix 82	AJ1	B	8	29	Right-handed alpha
Helix 83	AJ2	B	53	61	Right-handed alpha
Helix 84	AJ3	B	61	68	Right-handed alpha
Helix 85	AJ4	B	99	112	Right-handed alpha
Helix 86	AJ5	B	114	118	Right-handed 310
Helix 87	AJ6	B	119	126	Right-handed alpha
Helix 88	AJ7	B	150	161	Right-handed alpha
Helix 89	AJ8	B	161	167	Right-handed alpha
Helix 90	AJ9	B	189	196	Right-handed alpha
Helix 91	AK1	B	199	210	Right-handed alpha
Helix 92	AK2	B	242	248	Right-handed alpha
Helix 93	AK3	B	262	265	Right-handed alpha
Helix 94	AK4	B	298	314	Right-handed alpha
Helix 95	AK5	B	315	317	Right-handed 310
Helix 96	AK6	B	330	359	Right-handed alpha
Helix 97	AK7	B	361	366	Right-handed alpha
Helix 98	AK8	B	367	370	Right-handed 310
Helix 99	AK9	B	371	386	Right-handed alpha
Helix 100	AL1	B	391	424	Right-handed alpha
Helix 101	AL2	B	426	454	Right-handed alpha
Helix 102	AL3	B	455	457	Right-handed 310
Helix 103	AL4	B	460	497	Right-handed alpha
Helix 104	AL5	B	512	535	Right-handed alpha
Helix 105	AL6	B	539	559	Right-handed alpha
Helix 106	AL7	B	583	602	Right-handed alpha
Helix 107	AL8	B	633	637	Right-handed 310
Helix 108	AL9	B	639	642	Right-handed 310
Helix 109	AM1	B	643	656	Right-handed alpha
Helix 110	AM2	B	691	708	Right-handed alpha
Helix 111	AM3	B	732	739	Right-handed alpha
Helix 112	AM4	B	742	755	Right-handed alpha
Helix 113	AM5	B	777	780	Right-handed 310
Helix 114	AM6	B	782	788	Right-handed 310
Helix 115	AM7	B	801	804	Right-handed alpha
Helix 116	AM8	B	837	849	Right-handed alpha
Helix 117	AM9	B	861	869	Right-handed alpha
Helix 118	AN1	B	871	893	Right-handed alpha
Helix 119	AN2	B	896	903	Right-handed alpha
Helix 120	AN3	B	904	919	Right-handed alpha
Helix 121	AN4	B	924	955	Right-handed alpha
Helix 122	AN5	B	959	991	Right-handed alpha
Helix 123	AN6	B	996	1033	Right-handed alpha

There are 25 sheets in PDB entry 7RR8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	815	819	anti-parallel
Strand 6	A	822	831	anti-parallel
Strand 7	A	713	718	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	815	819	anti-parallel
Strand 6	A	822	831	anti-parallel
Strand 7	A	679	686	anti-parallel
Strand 8	A	855	859	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	284	293	anti-parallel
Strand 3	A	138	144	anti-parallel
Strand 4	A	321	328	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	284	293	anti-parallel
Strand 3	A	278	281	anti-parallel
Strand 4	A	606	615	anti-parallel
Strand 5	A	620	631	anti-parallel
Strand 6	A	571	577	anti-parallel
Strand 7	A	662	665	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	272	first strand
Strand 2	A	182	188	anti-parallel
Strand 3	A	767	775	parallel
Strand 4	A	757	764	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	219	first strand
Strand 2	A	232	235	anti-parallel
Strand 3	B	724	731	parallel
Strand 4	B	805	812	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	253	first strand
Strand 2	A	259	261	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	805	812	first strand
Strand 2	A	724	731	anti-parallel
Strand 3	C	232	235	parallel
Strand 4	C	215	219	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	790	792	first strand
Strand 2	A	798	800	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	82	first strand
Strand 2	C	87	94	anti-parallel
Strand 3	C	42	48	anti-parallel
Strand 4	C	128	132	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	138	143	anti-parallel
Strand 4	C	322	328	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	278	281	anti-parallel
Strand 4	C	606	613	anti-parallel
Strand 5	C	624	631	anti-parallel
Strand 6	C	571	577	anti-parallel
Strand 7	C	662	667	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	272	first strand
Strand 2	C	182	188	anti-parallel
Strand 3	C	768	775	parallel
Strand 4	C	757	763	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	259	261	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	717	718	first strand
Strand 2	C	827	828	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	810	812	first strand
Strand 2	C	724	728	anti-parallel
Strand 3	B	232	235	parallel
Strand 4	B	218	219	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	790	792	first strand
Strand 2	C	798	800	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	818	819	first strand
Strand 2	C	822	823	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	131	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	815	819	anti-parallel
Strand 6	B	822	831	anti-parallel
Strand 7	B	713	718	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	131	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	815	819	anti-parallel
Strand 6	B	822	831	anti-parallel
Strand 7	B	679	686	anti-parallel
Strand 8	B	855	859	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	178	first strand
Strand 2	B	284	291	anti-parallel
Strand 3	B	138	143	anti-parallel
Strand 4	B	323	328	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	178	first strand
Strand 2	B	284	291	anti-parallel
Strand 3	B	278	281	anti-parallel
Strand 4	B	606	613	anti-parallel
Strand 5	B	624	631	anti-parallel
Strand 6	B	571	577	anti-parallel
Strand 7	B	662	667	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	272	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	768	775	parallel
Strand 4	B	757	763	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	253	first strand
Strand 2	B	259	261	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	790	792	first strand
Strand 2	B	798	800	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RR8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RR8