Analysis of interatomic Contacts of Structural Units in PDB entry:
7RR9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RR9 entry

There are 2 chains in PDB entry 7RR9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 63LEU 684
B
 ALA 63LEU 684
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7RR9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 83Right-handed alpha
Helix 2
AA2
A
88 125Right-handed alpha
Helix 3
AA3
A
126 141Right-handed alpha
Helix 4
AA4
A
141 175Right-handed alpha
Helix 5
AA5
A
178 186Right-handed alpha
Helix 6
AA6
A
192 237Right-handed alpha
Helix 7
AA7
A
242 261Right-handed alpha
Helix 8
AA8
A
264 289Right-handed alpha
Helix 9
AA9
A
289 297Right-handed alpha
Helix 10
AB1
A
298 343Right-handed alpha
Helix 11
AB2
A
381 395Right-handed alpha
Helix 12
AB3
A
395 431Right-handed alpha
Helix 13
AB4
A
512 521Right-handed alpha
Helix 14
AB5
A
552 558Right-handed alpha
Helix 15
AB6
A
563 568Right-handed alpha
Helix 16
AB7
A
572 583Right-handed alpha
Helix 17
AB8
A
585 593Right-handed alpha
Helix 18
AB9
A
607 622Right-handed alpha
Helix 19
AC1
A
636 651Right-handed alpha
Helix 20
AC2
A
660 666Right-handed 310
Helix 21
AC3
B
68 83Right-handed alpha
Helix 22
AC4
B
88 125Right-handed alpha
Helix 23
AC5
B
126 141Right-handed alpha
Helix 24
AC6
B
141 175Right-handed alpha
Helix 25
AC7
B
178 186Right-handed alpha
Helix 26
AC8
B
192 237Right-handed alpha
Helix 27
AC9
B
242 261Right-handed alpha
Helix 28
AD1
B
264 289Right-handed alpha
Helix 29
AD2
B
289 297Right-handed alpha
Helix 30
AD3
B
298 343Right-handed alpha
Helix 31
AD4
B
381 395Right-handed alpha
Helix 32
AD5
B
395 431Right-handed alpha
Helix 33
AD6
B
512 521Right-handed alpha
Helix 34
AD7
B
552 558Right-handed alpha
Helix 35
AD8
B
563 568Right-handed alpha
Helix 36
AD9
B
572 583Right-handed alpha
Helix 37
AE1
B
585 593Right-handed alpha
Helix 38
AE2
B
607 622Right-handed alpha
Helix 39
AE3
B
636 651Right-handed alpha
Helix 40
AE4
B
660 666Right-handed 310
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There are 6 sheets in PDB entry 7RR9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
530 533parallel
Strand 3
A
475 477anti-parallel
Strand 4
A
494 496anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 482first strand
Strand 2
A
488 490anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 542first strand
Strand 2
A
625 629parallel
Strand 3
A
653 657parallel
Strand 4
A
503 506parallel
Strand 5
A
669 673parallel
Strand 6
A
679 683anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 469first strand
Strand 2
B
530 533parallel
Strand 3
B
475 477anti-parallel
Strand 4
B
494 496anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 482first strand
Strand 2
B
488 490anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
539 542first strand
Strand 2
B
625 629parallel
Strand 3
B
653 657parallel
Strand 4
B
503 506parallel
Strand 5
B
669 673parallel
Strand 6
B
679 683anti-parallel
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