Analysis of interatomic Contacts of Structural Units in PDB entry:
7RRG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RRG entry

There are 5 chains in PDB entry 7RRG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1TRP 274
B
 MET 0MET 99
D
 ALA 3ILE 194
E
 ALA 3GLY 242
C
 ALA 1LYS 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7RRG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 55Right-handed 310
Helix 2
AA2
A
56 85Right-handed alpha
Helix 3
AA3
A
137 149Right-handed alpha
Helix 4
AA4
A
151 162Right-handed alpha
Helix 5
AA5
A
162 175Right-handed alpha
Helix 6
AA6
A
175 180Right-handed alpha
Helix 7
AA7
D
80 84Right-handed 310
Helix 8
AA8
D
95 99Right-handed 310
Helix 9
AA9
E
84 88Right-handed 310
Helix 10
AB1
E
117 121Right-handed 310
Helix 11
AB2
E
132 140Right-handed alpha
Helix 12
AB3
E
199 204Right-handed alpha
Helix 13
AB4
E
219 223Right-handed 310
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There are 17 sheets in PDB entry 7RRG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
31 37anti-parallel
Strand 3
A
21 28anti-parallel
Strand 4
A
3 12anti-parallel
Strand 5
A
94 103anti-parallel
Strand 6
A
109 118anti-parallel
Strand 7
A
121 126anti-parallel
Strand 8
A
133 135anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 192first strand
Strand 2
A
199 208anti-parallel
Strand 3
A
241 249anti-parallel
Strand 4
A
229 230anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 192first strand
Strand 2
A
199 208anti-parallel
Strand 3
A
241 249anti-parallel
Strand 4
A
234 235anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
214 219anti-parallel
Strand 3
A
257 262anti-parallel
Strand 4
A
270 273anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
21 30anti-parallel
Strand 3
B
62 70anti-parallel
Strand 4
B
50 51anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
21 30anti-parallel
Strand 3
B
62 70anti-parallel
Strand 4
B
55 56anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 45first strand
Strand 2
B
35 41anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
91 94anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 14first strand
Strand 2
D
107 112parallel
Strand 3
D
85 92anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
45 51anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 24first strand
Strand 2
D
71 76anti-parallel
Strand 3
D
62 64anti-parallel
Strand 4
D
56 57anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
156 157first strand
Strand 2
D
170 178anti-parallel
Strand 3
D
161 165anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
156 157first strand
Strand 2
D
170 178anti-parallel
Strand 3
D
134 139anti-parallel
Strand 4
D
121 127anti-parallel
Strand 5
E
129 130anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 8first strand
Strand 2
E
20 25anti-parallel
Strand 3
E
76 80anti-parallel
Strand 4
E
66 69anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
11 15first strand
Strand 2
E
110 115parallel
Strand 3
E
89 96anti-parallel
Strand 4
E
32 38anti-parallel
Strand 5
E
45 51anti-parallel
Strand 6
E
54 57anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
11 15first strand
Strand 2
E
110 115parallel
Strand 3
E
89 96anti-parallel
Strand 4
E
105 106anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
141 151first strand
Strand 2
E
189 198anti-parallel
Strand 3
E
171 173anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
141 151first strand
Strand 2
E
189 198anti-parallel
Strand 3
E
178 179anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
156 162first strand
Strand 2
E
209 215anti-parallel
Strand 3
E
235 240anti-parallel
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