Analysis of interatomic Contacts of Structural Units in PDB entry:
7RRY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RRY entry

There are 11 chains in PDB entry 7RRY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 308GLU 380
A
 ALA 382LYS 416
A
 VAL 418ALA 551
B
 SER 305GLU 380
B
 ALA 382LYS 416
B
 VAL 418LEU 544
C
 ALA 307GLU 380
C
 ALA 382LYS 416
C
 VAL 418ARG 548
D
 LEU 306GLU 380
D
 ALA 382LEU 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 7RRY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
311 322Right-handed alpha
Helix 2
AA2
A
338 363Right-handed alpha
Helix 3
AA3
A
366 370Right-handed 310
Helix 4
AA4
A
371 396Right-handed alpha
Helix 5
AA5
A
412 416Right-handed alpha
Helix 6
AA6
A
420 439Right-handed alpha
Helix 7
AA7
A
441 456Right-handed alpha
Helix 8
AA8
A
457 461Right-handed 310
Helix 9
AA9
A
465 466Right-handed 310
Helix 10
AB1
A
468 468Right-handed 310
Helix 11
AB2
A
469 493Right-handed alpha
Helix 12
AB3
A
496 528Right-handed alpha
Helix 13
AB4
A
537 549Right-handed alpha
Helix 14
AB5
B
306 310Right-handed 310
Helix 15
AB6
B
311 322Right-handed alpha
Helix 16
AB7
B
342 363Right-handed alpha
Helix 17
AB8
B
366 370Right-handed 310
Helix 18
AB9
B
371 396Right-handed alpha
Helix 19
AC1
B
413 418Right-handed 310
Helix 20
AC2
B
422 439Right-handed alpha
Helix 21
AC3
B
441 456Right-handed alpha
Helix 22
AC4
B
457 461Right-handed 310
Helix 23
AC5
B
465 493Right-handed alpha
Helix 24
AC6
B
496 526Right-handed alpha
Helix 25
AC7
B
536 537Right-handed 310
Helix 26
AC8
B
539 539Right-handed 310
Helix 27
AC9
B
540 544Right-handed alpha
Helix 28
AD1
C
311 322Right-handed alpha
Helix 29
AD2
C
338 363Right-handed alpha
Helix 30
AD3
C
366 370Right-handed 310
Helix 31
AD4
C
371 396Right-handed alpha
Helix 32
AD5
C
412 416Right-handed alpha
Helix 33
AD6
C
422 439Right-handed alpha
Helix 34
AD7
C
441 456Right-handed alpha
Helix 35
AD8
C
457 461Right-handed 310
Helix 36
AD9
C
466 493Right-handed alpha
Helix 37
AE1
C
496 525Right-handed alpha
Helix 38
AE2
C
538 548Right-handed alpha
Helix 39
AE3
D
306 310Right-handed 310
Helix 40
AE4
D
311 322Right-handed alpha
Helix 41
AE5
D
342 363Right-handed alpha
Helix 42
AE6
D
366 370Right-handed 310
Helix 43
AE7
D
371 396Right-handed alpha
Helix 44
AE8
D
421 439Right-handed alpha
Helix 45
AE9
D
441 456Right-handed alpha
Helix 46
AF1
D
457 461Right-handed 310
Helix 47
AF2
D
469 493Right-handed alpha
Helix 48
AF3
D
496 526Right-handed alpha
Helix 49
AF4
D
539 540Right-handed 310
Helix 50
AF5
D
542 544Right-handed 310
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There are 4 sheets in PDB entry 7RRY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 405first strand
Strand 2
A
408 411anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 405first strand
Strand 2
B
408 411anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
401 405first strand
Strand 2
C
408 411anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
401 405first strand
Strand 2
D
408 411anti-parallel
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