Analysis of interatomic Contacts of Structural Units in PDB entry:
7RSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RSJ entry

There is 1 chain in PDB entry 7RSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 287ALA 872
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 7RSJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
289 302Right-handed alpha
Helix 2
AA2
A
309 319Right-handed alpha
Helix 3
AA3
A
319 324Right-handed alpha
Helix 4
AA4
A
325 328Right-handed 310
Helix 5
AA5
A
329 335Right-handed alpha
Helix 6
AA6
A
341 355Right-handed alpha
Helix 7
AA7
A
359 364Right-handed alpha
Helix 8
AA8
A
365 368Right-handed 310
Helix 9
AA9
A
373 385Right-handed alpha
Helix 10
AB1
A
388 403Right-handed alpha
Helix 11
AB2
A
404 406Right-handed 310
Helix 12
AB3
A
407 414Right-handed alpha
Helix 13
AB4
A
441 445Right-handed 310
Helix 14
AB5
A
474 486Right-handed alpha
Helix 15
AB6
A
486 503Right-handed alpha
Helix 16
AB7
A
503 510Right-handed alpha
Helix 17
AB8
A
510 530Right-handed alpha
Helix 18
AB9
A
532 561Right-handed alpha
Helix 19
AC1
A
565 579Right-handed alpha
Helix 20
AC2
A
579 584Right-handed alpha
Helix 21
AC3
A
606 609Right-handed 310
Helix 22
AC4
A
641 661Right-handed alpha
Helix 23
AC5
A
690 698Right-handed alpha
Helix 24
AC6
A
699 708Right-handed alpha
Helix 25
AC7
A
713 717Right-handed 310
Helix 26
AC8
A
718 739Right-handed alpha
Helix 27
AC9
A
780 787Right-handed alpha
Helix 28
AD1
A
792 812Right-handed alpha
Helix 29
AD2
A
812 822Right-handed alpha
Helix 30
AD3
A
828 833Right-handed alpha
Helix 31
AD4
A
834 844Right-handed alpha
Helix 32
AD5
A
845 847Right-handed 310
Helix 33
AD6
A
851 872Right-handed alpha
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There are 3 sheets in PDB entry 7RSJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
591 593first strand
Strand 2
A
596 604anti-parallel
Strand 3
A
619 625anti-parallel
Strand 4
A
610 611anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
591 593first strand
Strand 2
A
596 604anti-parallel
Strand 3
A
619 625anti-parallel
Strand 4
A
630 637anti-parallel
Strand 5
A
679 683anti-parallel
Strand 6
A
672 674anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
688 689first strand
Strand 2
A
749 751anti-parallel
Strand 3
A
757 759anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il