Analysis of interatomic Contacts of Structural Units in PDB entry:
7RTY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RTY entry

There are 2 chains in PDB entry 7RTY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 14MET 257
B
 MET 14MET 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7RTY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 49Right-handed alpha
Helix 2
AA2
A
64 74Right-handed alpha
Helix 3
AA3
A
114 121Right-handed alpha
Helix 4
AA4
A
129 140Right-handed alpha
Helix 5
AA5
A
160 168Right-handed alpha
Helix 6
AA6
A
176 179Right-handed 310
Helix 7
AA7
A
180 191Right-handed alpha
Helix 8
AA8
A
224 230Right-handed alpha
Helix 9
AA9
A
241 257Right-handed alpha
Helix 10
AB1
B
35 49Right-handed alpha
Helix 11
AB2
B
64 74Right-handed alpha
Helix 12
AB3
B
114 120Right-handed alpha
Helix 13
AB4
B
129 140Right-handed alpha
Helix 14
AB5
B
160 168Right-handed alpha
Helix 15
AB6
B
176 179Right-handed 310
Helix 16
AB7
B
180 191Right-handed alpha
Helix 17
AB8
B
224 231Right-handed alpha
Helix 18
AB9
B
241 257Right-handed alpha
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There are 4 sheets in PDB entry 7RTY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
88 90anti-parallel
Strand 3
A
93 102anti-parallel
Strand 4
A
108 113anti-parallel
Strand 5
A
144 149anti-parallel
Strand 6
A
170 174parallel
Strand 7
A
194 198parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
88 90anti-parallel
Strand 3
A
93 102anti-parallel
Strand 4
A
53 59parallel
Strand 5
A
16 23parallel
Strand 6
A
211 215anti-parallel
Strand 7
A
235 237anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 82first strand
Strand 2
B
89 90anti-parallel
Strand 3
B
93 102anti-parallel
Strand 4
B
108 112anti-parallel
Strand 5
B
145 149anti-parallel
Strand 6
B
170 174parallel
Strand 7
B
194 198parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 82first strand
Strand 2
B
89 90anti-parallel
Strand 3
B
93 102anti-parallel
Strand 4
B
53 59parallel
Strand 5
B
16 23parallel
Strand 6
B
211 215anti-parallel
Strand 7
B
235 237anti-parallel
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