Analysis of interatomic Contacts of Structural Units in PDB entry:
7RU7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RU7 entry

There is 1 chain in PDB entry 7RU7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7RU7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 15Right-handed alpha
Helix 2
AA2
A
24 37Right-handed alpha
Helix 3
AA3
A
49 51Right-handed 310
Helix 4
AA4
A
53 64Right-handed alpha
Helix 5
AA5
A
71 81Right-handed alpha
Helix 6
AA6
A
84 86Right-handed 310
Helix 7
AA7
A
96 107Right-handed alpha
Helix 8
AA8
A
115 130Right-handed alpha
Helix 9
AA9
A
165 175Right-handed alpha
Helix 10
AB1
A
194 217Right-handed alpha
Helix 11
AB2
A
241 259Right-handed alpha
Helix 12
AB3
A
271 276Right-handed alpha
Helix 13
AB4
A
306 311Right-handed 310
Helix 14
AB5
A
376 380Right-handed 310
Helix 15
AB6
A
383 387Right-handed 310
Helix 16
AB7
A
408 418Right-handed alpha
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There are 3 sheets in PDB entry 7RU7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
366 369anti-parallel
Strand 3
A
279 291anti-parallel
Strand 4
A
294 299anti-parallel
Strand 5
A
336 342parallel
Strand 6
A
351 359anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
366 369anti-parallel
Strand 3
A
279 291anti-parallel
Strand 4
A
19 23anti-parallel
Strand 5
A
391 396parallel
Strand 6
A
399 404anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
133 140parallel
Strand 3
A
179 185parallel
Strand 4
A
222 224parallel
Strand 5
A
265 270parallel
Strand 6
A
42 47parallel
Strand 7
A
66 69parallel
Strand 8
A
88 90parallel
Strand 9
A
110 113parallel
Strand 10
A
133 140parallel
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