Analysis of interatomic Contacts of Structural Units in PDB entry:
7RUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RUC entry

There are 7 chains in PDB entry 7RUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 16PRO 339
B
 GLU 16PRO 339
C
 ARG 18PRO 288
D
 GLU 1008ARG 1050
F
 ARG 18PRO 288
G
 GLU 1008PRO 1114
H
 PRO 93SER 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7RUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 28Right-handed alpha
Helix 2
AA2
A
43 57Right-handed alpha
Helix 3
AA3
A
72 78Right-handed alpha
Helix 4
AA4
A
116 132Right-handed alpha
Helix 5
AA5
A
135 152Right-handed alpha
Helix 6
AA6
A
163 187Right-handed alpha
Helix 7
AA7
A
210 232Right-handed alpha
Helix 8
AA8
A
245 263Right-handed alpha
Helix 9
AA9
A
283 304Right-handed alpha
Helix 10
AB1
A
321 334Right-handed alpha
Helix 11
AB2
B
22 28Right-handed alpha
Helix 12
AB3
B
43 57Right-handed alpha
Helix 13
AB4
B
72 78Right-handed alpha
Helix 14
AB5
B
116 131Right-handed alpha
Helix 15
AB6
B
132 134Right-handed 310
Helix 16
AB7
B
135 152Right-handed alpha
Helix 17
AB8
B
163 190Right-handed alpha
Helix 18
AB9
B
211 232Right-handed alpha
Helix 19
AC1
B
245 263Right-handed alpha
Helix 20
AC2
B
283 304Right-handed alpha
Helix 21
AC3
B
321 334Right-handed alpha
Helix 22
AC4
C
20 37Right-handed alpha
Helix 23
AC5
C
38 56Right-handed alpha
Helix 24
AC6
C
58 76Right-handed alpha
Helix 25
AC7
C
78 96Right-handed alpha
Helix 26
AC8
C
101 115Right-handed alpha
Helix 27
AC9
C
120 133Right-handed alpha
Helix 28
AD1
C
142 156Right-handed alpha
Helix 29
AD2
C
158 169Right-handed alpha
Helix 30
AD3
C
171 186Right-handed alpha
Helix 31
AD4
C
188 190Right-handed 310
Helix 32
AD5
C
191 206Right-handed alpha
Helix 33
AD6
C
208 223Right-handed alpha
Helix 34
AD7
C
234 250Right-handed alpha
Helix 35
AD8
C
251 262Right-handed alpha
Helix 36
AD9
C
262 267Right-handed alpha
Helix 37
AE1
C
270 285Right-handed alpha
Helix 38
AE2
D
1009 1014Right-handed alpha
Helix 39
AE3
D
1015 1017Right-handed 310
Helix 40
AE4
D
1018 1030Right-handed alpha
Helix 41
AE5
D
1039 1044Right-handed alpha
Helix 42
AE6
F
21 37Right-handed alpha
Helix 43
AE7
F
38 57Right-handed alpha
Helix 44
AE8
F
58 77Right-handed alpha
Helix 45
AE9
F
78 97Right-handed alpha
Helix 46
AF1
F
101 115Right-handed alpha
Helix 47
AF2
F
119 133Right-handed alpha
Helix 48
AF3
F
142 156Right-handed alpha
Helix 49
AF4
F
158 169Right-handed alpha
Helix 50
AF5
F
172 187Right-handed alpha
Helix 51
AF6
F
188 190Right-handed 310
Helix 52
AF7
F
191 206Right-handed alpha
Helix 53
AF8
F
208 223Right-handed alpha
Helix 54
AF9
F
234 248Right-handed alpha
Helix 55
AG1
F
251 262Right-handed alpha
Helix 56
AG2
F
262 267Right-handed alpha
Helix 57
AG3
F
269 284Right-handed alpha
Helix 58
AG4
G
1017 1032Right-handed alpha
Helix 59
AG5
G
1039 1044Right-handed alpha
Helix 60
AG6
G
1062 1075Right-handed alpha
Helix 61
AG7
G
1081 1089Right-handed alpha
Helix 62
AG8
G
1092 1111Right-handed alpha
Helix 63
AG9
H
94 107Right-handed alpha
Helix 64
AH1
H
108 130Right-handed alpha
Helix 65
AH2
H
133 140Right-handed alpha
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There are 2 sheets in PDB entry 7RUC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
94 98anti-parallel
Strand 3
A
62 66parallel
Strand 4
A
156 160parallel
Strand 5
A
33 37parallel
Strand 6
A
236 243parallel
Strand 7
A
268 274parallel
Strand 8
A
308 313parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 87first strand
Strand 2
B
94 98anti-parallel
Strand 3
B
62 66parallel
Strand 4
B
156 160parallel
Strand 5
B
33 37parallel
Strand 6
B
236 242parallel
Strand 7
B
268 274parallel
Strand 8
B
308 313parallel
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