Analysis of interatomic Contacts of Structural Units in PDB entry:
7RUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RUT entry

There are 6 chains in PDB entry 7RUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 PRO 56GLY 249
C
 PRO 56ASN 241
F
 PRO 56ASN 241
B
 PRO 56ASP 242
A
 PRO 56ASN 241
D
 PRO 56LYS 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 7RUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
80 107Right-handed alpha
Helix 2
AA2
E
110 129Right-handed alpha
Helix 3
AA3
E
147 162Right-handed alpha
Helix 4
AA4
E
176 202Right-handed alpha
Helix 5
AA5
E
206 232Right-handed alpha
Helix 6
AA6
C
80 106Right-handed alpha
Helix 7
AA7
C
107 109Right-handed 310
Helix 8
AA8
C
110 129Right-handed alpha
Helix 9
AA9
C
131 135Right-handed 310
Helix 10
AB1
C
136 141Right-handed alpha
Helix 11
AB2
C
147 163Right-handed alpha
Helix 12
AB3
C
176 202Right-handed alpha
Helix 13
AB4
C
206 232Right-handed alpha
Helix 14
AB5
F
80 106Right-handed alpha
Helix 15
AB6
F
107 109Right-handed 310
Helix 16
AB7
F
110 129Right-handed alpha
Helix 17
AB8
F
131 135Right-handed 310
Helix 18
AB9
F
136 138Right-handed 310
Helix 19
AC1
F
139 144Right-handed alpha
Helix 20
AC2
F
147 162Right-handed alpha
Helix 21
AC3
F
176 202Right-handed alpha
Helix 22
AC4
F
206 231Right-handed alpha
Helix 23
AC5
B
80 106Right-handed alpha
Helix 24
AC6
B
110 129Right-handed alpha
Helix 25
AC7
B
131 135Right-handed 310
Helix 26
AC8
B
136 143Right-handed 310
Helix 27
AC9
B
147 164Right-handed alpha
Helix 28
AD1
B
176 202Right-handed alpha
Helix 29
AD2
B
206 231Right-handed alpha
Helix 30
AD3
A
80 107Right-handed alpha
Helix 31
AD4
A
110 129Right-handed alpha
Helix 32
AD5
A
131 135Right-handed 310
Helix 33
AD6
A
136 138Right-handed 310
Helix 34
AD7
A
139 144Right-handed alpha
Helix 35
AD8
A
147 162Right-handed alpha
Helix 36
AD9
A
176 202Right-handed alpha
Helix 37
AE1
A
206 231Right-handed alpha
Helix 38
AE2
D
80 106Right-handed alpha
Helix 39
AE3
D
107 109Right-handed 310
Helix 40
AE4
D
110 129Right-handed alpha
Helix 41
AE5
D
136 138Right-handed 310
Helix 42
AE6
D
139 144Right-handed alpha
Helix 43
AE7
D
147 162Right-handed alpha
Helix 44
AE8
D
176 202Right-handed alpha
Helix 45
AE9
D
206 231Right-handed alpha
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There are 6 sheets in PDB entry 7RUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
67 69first strand
Strand 2
E
75 77anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 69first strand
Strand 2
C
75 77anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
67 69first strand
Strand 2
F
75 77anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
75 77anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
75 77anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 69first strand
Strand 2
D
75 77anti-parallel
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