Analysis of interatomic Contacts of Structural Units in PDB entry:
7RWS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RWS entry

There is 1 chain in PDB entry 7RWS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 122GLU 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 7RWS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
143 145Right-handed 310
Helix 2
AA2
A
146 153Right-handed alpha
Helix 3
AA3
A
177 192Right-handed alpha
Helix 4
AA4
A
193 199Right-handed alpha
Helix 5
AA5
A
210 222Right-handed alpha
Helix 6
AA6
A
278 282Right-handed 310
Helix 7
AA7
A
287 291Right-handed 310
Helix 8
AA8
A
309 324Right-handed alpha
Helix 9
AA9
A
324 332Right-handed alpha
Helix 10
AB1
A
346 356Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7RWS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 165first strand
Strand 2
A
124 131parallel
Strand 3
A
203 208parallel
Strand 4
A
227 229parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 255first strand
Strand 2
A
294 299anti-parallel
Strand 3
A
266 272parallel
Strand 4
A
337 343parallel
Strand 5
A
363 370parallel
Strand 6
A
374 381anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il