Analysis of interatomic Contacts of Structural Units in PDB entry:
7RX9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RX9 entry

There is 1 chain in PDB entry 7RX9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 42TYR 644
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7RX9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
44 75Right-handed alpha
Helix 2
AA2
A
75 80Right-handed alpha
Helix 3
AA3
A
92 101Right-handed alpha
Helix 4
AA4
A
102 121Right-handed alpha
Helix 5
AA5
A
131 138Right-handed alpha
Helix 6
AA6
A
140 143Right-handed 310
Helix 7
AA7
A
144 163Right-handed alpha
Helix 8
AA8
A
165 179Right-handed alpha
Helix 9
AA9
A
187 212Right-handed alpha
Helix 10
AB1
A
219 237Right-handed alpha
Helix 11
AB2
A
237 256Right-handed alpha
Helix 12
AB3
A
264 268Right-handed 310
Helix 13
AB4
A
490 494Right-handed 310
Helix 14
AB5
A
519 565Right-handed alpha
Helix 15
AB6
A
566 569Right-handed 310
Helix 16
AB7
A
587 597Right-handed alpha
Helix 17
AB8
A
602 616Right-handed alpha
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There are 2 sheets in PDB entry 7RX9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
257 258first strand
Strand 2
A
468 475parallel
Strand 3
A
297 302anti-parallel
Strand 4
A
285 294anti-parallel
Strand 5
A
272 282anti-parallel
Strand 6
A
511 516anti-parallel
Strand 7
A
501 506anti-parallel
Strand 8
A
479 483anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
572 574first strand
Strand 2
A
581 586anti-parallel
Strand 3
A
634 637anti-parallel
Strand 4
A
619 621anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il