Analysis of interatomic Contacts of Structural Units in PDB entry:
7RY3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7RY3 entry

There are 3 chains in PDB entry 7RY3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 1047
B	MET 1	LYS 1045
C	MET 1	PRO 1048

There are124 helices in PDB entry 7RY3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	7	Right-handed alpha
Helix 2	AA2	A	8	29	Right-handed alpha
Helix 3	AA3	A	53	61	Right-handed alpha
Helix 4	AA4	A	61	69	Right-handed alpha
Helix 5	AA5	A	99	115	Right-handed alpha
Helix 6	AA6	A	116	118	Right-handed 310
Helix 7	AA7	A	119	126	Right-handed alpha
Helix 8	AA8	A	150	161	Right-handed alpha
Helix 9	AA9	A	162	168	Right-handed alpha
Helix 10	AB1	A	189	196	Right-handed alpha
Helix 11	AB2	A	199	211	Right-handed alpha
Helix 12	AB3	A	242	248	Right-handed alpha
Helix 13	AB4	A	262	265	Right-handed alpha
Helix 14	AB5	A	298	315	Right-handed alpha
Helix 15	AB6	A	329	360	Right-handed alpha
Helix 16	AB7	A	361	386	Right-handed alpha
Helix 17	AB8	A	391	406	Right-handed alpha
Helix 18	AB9	A	406	424	Right-handed alpha
Helix 19	AC1	A	426	452	Right-handed alpha
Helix 20	AC2	A	454	459	Right-handed alpha
Helix 21	AC3	A	460	497	Right-handed alpha
Helix 22	AC4	A	509	539	Right-handed alpha
Helix 23	AC5	A	539	561	Right-handed alpha
Helix 24	AC6	A	585	602	Right-handed alpha
Helix 25	AC7	A	634	638	Right-handed 310
Helix 26	AC8	A	644	652	Right-handed alpha
Helix 27	AC9	A	654	659	Right-handed alpha
Helix 28	AD1	A	673	677	Right-handed 310
Helix 29	AD2	A	694	710	Right-handed alpha
Helix 30	AD3	A	733	741	Right-handed alpha
Helix 31	AD4	A	743	756	Right-handed alpha
Helix 32	AD5	A	778	782	Right-handed 310
Helix 33	AD6	A	783	789	Right-handed 310
Helix 34	AD7	A	802	805	Right-handed alpha
Helix 35	AD8	A	837	856	Right-handed alpha
Helix 36	AD9	A	866	898	Right-handed alpha
Helix 37	AE1	A	900	909	Right-handed alpha
Helix 38	AE2	A	909	929	Right-handed alpha
Helix 39	AE3	A	936	967	Right-handed alpha
Helix 40	AE4	A	970	1002	Right-handed alpha
Helix 41	AE5	A	1007	1028	Right-handed alpha
Helix 42	AE6	A	1028	1044	Right-handed alpha
Helix 43	AE7	B	2	7	Right-handed alpha
Helix 44	AE8	B	8	29	Right-handed alpha
Helix 45	AE9	B	53	61	Right-handed alpha
Helix 46	AF1	B	61	68	Right-handed alpha
Helix 47	AF2	B	99	118	Right-handed alpha
Helix 48	AF3	B	119	126	Right-handed alpha
Helix 49	AF4	B	150	162	Right-handed alpha
Helix 50	AF5	B	162	168	Right-handed alpha
Helix 51	AF6	B	189	196	Right-handed alpha
Helix 52	AF7	B	199	211	Right-handed alpha
Helix 53	AF8	B	242	248	Right-handed alpha
Helix 54	AF9	B	262	265	Right-handed alpha
Helix 55	AG1	B	298	314	Right-handed alpha
Helix 56	AG2	B	315	317	Right-handed 310
Helix 57	AG3	B	329	359	Right-handed alpha
Helix 58	AG4	B	361	387	Right-handed alpha
Helix 59	AG5	B	391	423	Right-handed alpha
Helix 60	AG6	B	426	454	Right-handed alpha
Helix 61	AG7	B	455	459	Right-handed 310
Helix 62	AG8	B	461	487	Right-handed alpha
Helix 63	AG9	B	487	496	Right-handed alpha
Helix 64	AH1	B	509	540	Right-handed alpha
Helix 65	AH2	B	540	561	Right-handed alpha
Helix 66	AH3	B	585	603	Right-handed alpha
Helix 67	AH4	B	640	643	Right-handed 310
Helix 68	AH5	B	644	659	Right-handed alpha
Helix 69	AH6	B	693	711	Right-handed alpha
Helix 70	AH7	B	733	741	Right-handed alpha
Helix 71	AH8	B	743	756	Right-handed alpha
Helix 72	AH9	B	777	782	Right-handed alpha
Helix 73	AI1	B	783	789	Right-handed 310
Helix 74	AI2	B	802	805	Right-handed alpha
Helix 75	AI3	B	837	851	Right-handed alpha
Helix 76	AI4	B	851	856	Right-handed alpha
Helix 77	AI5	B	865	875	Right-handed alpha
Helix 78	AI6	B	877	898	Right-handed alpha
Helix 79	AI7	B	901	909	Right-handed alpha
Helix 80	AI8	B	909	928	Right-handed alpha
Helix 81	AI9	B	936	968	Right-handed alpha
Helix 82	AJ1	B	970	982	Right-handed alpha
Helix 83	AJ2	B	982	1002	Right-handed alpha
Helix 84	AJ3	B	1007	1044	Right-handed alpha
Helix 85	AJ4	C	2	7	Right-handed alpha
Helix 86	AJ5	C	8	30	Right-handed alpha
Helix 87	AJ6	C	53	61	Right-handed alpha
Helix 88	AJ7	C	61	67	Right-handed alpha
Helix 89	AJ8	C	99	112	Right-handed alpha
Helix 90	AJ9	C	119	126	Right-handed alpha
Helix 91	AK1	C	150	161	Right-handed alpha
Helix 92	AK2	C	162	168	Right-handed alpha
Helix 93	AK3	C	189	196	Right-handed alpha
Helix 94	AK4	C	199	211	Right-handed alpha
Helix 95	AK5	C	242	248	Right-handed alpha
Helix 96	AK6	C	262	265	Right-handed alpha
Helix 97	AK7	C	298	315	Right-handed alpha
Helix 98	AK8	C	329	359	Right-handed alpha
Helix 99	AK9	C	362	387	Right-handed alpha
Helix 100	AL1	C	391	423	Right-handed alpha
Helix 101	AL2	C	426	454	Right-handed alpha
Helix 102	AL3	C	454	459	Right-handed alpha
Helix 103	AL4	C	460	487	Right-handed alpha
Helix 104	AL5	C	487	497	Right-handed alpha
Helix 105	AL6	C	509	539	Right-handed alpha
Helix 106	AL7	C	539	560	Right-handed alpha
Helix 107	AL8	C	585	604	Right-handed alpha
Helix 108	AL9	C	644	653	Right-handed alpha
Helix 109	AM1	C	654	659	Right-handed alpha
Helix 110	AM2	C	693	711	Right-handed alpha
Helix 111	AM3	C	733	741	Right-handed alpha
Helix 112	AM4	C	743	755	Right-handed alpha
Helix 113	AM5	C	778	782	Right-handed 310
Helix 114	AM6	C	783	789	Right-handed 310
Helix 115	AM7	C	802	805	Right-handed alpha
Helix 116	AM8	C	837	851	Right-handed alpha
Helix 117	AM9	C	851	856	Right-handed alpha
Helix 118	AN1	C	866	875	Right-handed alpha
Helix 119	AN2	C	876	898	Right-handed alpha
Helix 120	AN3	C	902	908	Right-handed alpha
Helix 121	AN4	C	909	928	Right-handed alpha
Helix 122	AN5	C	936	967	Right-handed alpha
Helix 123	AN6	C	970	1002	Right-handed alpha
Helix 124	AN7	C	1007	1044	Right-handed alpha

There are 26 sheets in PDB entry 7RY3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	131	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	816	820	anti-parallel
Strand 6	A	823	832	anti-parallel
Strand 7	A	714	720	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	131	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	816	820	anti-parallel
Strand 6	A	823	832	anti-parallel
Strand 7	A	682	687	anti-parallel
Strand 8	A	861	864	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	177	first strand
Strand 2	A	287	292	anti-parallel
Strand 3	A	138	143	anti-parallel
Strand 4	A	322	328	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	272	first strand
Strand 2	A	182	188	anti-parallel
Strand 3	A	772	776	parallel
Strand 4	A	758	761	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	219	first strand
Strand 2	A	232	233	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	253	first strand
Strand 2	A	259	261	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	285	first strand
Strand 2	A	278	281	anti-parallel
Strand 3	A	607	614	anti-parallel
Strand 4	A	626	632	anti-parallel
Strand 5	A	573	579	anti-parallel
Strand 6	A	664	668	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	806	813	first strand
Strand 2	A	725	732	anti-parallel
Strand 3	C	233	237	parallel
Strand 4	C	215	218	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	764	765	first strand
Strand 2	A	768	769	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	791	793	first strand
Strand 2	A	799	801	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	130	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	816	820	anti-parallel
Strand 6	B	823	832	anti-parallel
Strand 7	B	714	719	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	130	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	816	820	anti-parallel
Strand 6	B	823	832	anti-parallel
Strand 7	B	682	688	anti-parallel
Strand 8	B	860	864	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	178	first strand
Strand 2	B	287	293	anti-parallel
Strand 3	B	138	143	anti-parallel
Strand 4	B	322	325	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	272	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	768	776	parallel
Strand 4	B	758	765	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	219	first strand
Strand 2	B	232	235	anti-parallel
Strand 3	C	725	732	parallel
Strand 4	C	806	813	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	253	first strand
Strand 2	B	259	261	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	285	first strand
Strand 2	B	278	281	anti-parallel
Strand 3	B	607	614	anti-parallel
Strand 4	B	625	632	anti-parallel
Strand 5	B	573	579	anti-parallel
Strand 6	B	664	669	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	725	732	first strand
Strand 2	B	806	813	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	791	793	first strand
Strand 2	B	799	801	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	131	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	75	83	anti-parallel
Strand 5	C	816	820	anti-parallel
Strand 6	C	823	832	anti-parallel
Strand 7	C	714	718	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	131	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	75	83	anti-parallel
Strand 5	C	816	820	anti-parallel
Strand 6	C	823	832	anti-parallel
Strand 7	C	682	688	anti-parallel
Strand 8	C	860	864	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	178	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	136	143	anti-parallel
Strand 4	C	322	328	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	178	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	278	281	anti-parallel
Strand 4	C	607	614	anti-parallel
Strand 5	C	625	632	anti-parallel
Strand 6	C	573	579	anti-parallel
Strand 7	C	664	669	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	272	first strand
Strand 2	C	182	188	anti-parallel
Strand 3	C	768	776	parallel
Strand 4	C	758	765	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	259	261	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	791	793	first strand
Strand 2	C	799	801	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7RY3

Analysis of interatomic Contacts of Structural Units in PDB entry:
7RY3