Analysis of interatomic Contacts of Structural Units in PDB entry:
7RY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RY6 entry

There is 1 chain in PDB entry 7RY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7RY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 30Right-handed alpha
Helix 2
AA2
A
52 66Right-handed alpha
Helix 3
AA3
A
100 118Right-handed alpha
Helix 4
AA4
A
120 124Right-handed 310
Helix 5
AA5
A
152 169Right-handed alpha
Helix 6
AA6
A
180 210Right-handed alpha
Helix 7
AA7
A
238 253Right-handed alpha
Helix 8
AA8
A
255 271Right-handed alpha
Helix 9
AA9
A
314 330Right-handed alpha
Helix 10
AB1
A
331 336Right-handed 310
Helix 11
AB2
A
337 348Right-handed alpha
Helix 12
AB3
A
413 434Right-handed alpha
Helix 13
AB4
A
435 439Right-handed 310
Helix 14
AB5
A
442 447Right-handed alpha
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There are 3 sheets in PDB entry 7RY6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
79 82anti-parallel
Strand 3
A
72 75anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
130 134parallel
Strand 3
A
140 146anti-parallel
Strand 4
A
42 48anti-parallel
Strand 5
A
376 378anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 237first strand
Strand 2
A
400 408anti-parallel
Strand 3
A
391 397anti-parallel
Strand 4
A
357 360parallel
Strand 5
A
277 284parallel
Strand 6
A
301 308anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il