Analysis of interatomic Contacts of Structural Units in PDB entry:
7S01

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7S01 entry

There are 3 chains in PDB entry 7S01 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 2	ILE 464
d	MET 1	ASN 426
c	MET 1	VAL 319

There are121 helices in PDB entry 7S01. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	26	Right-handed alpha
Helix 2	AA2	A	28	33	Right-handed 310
Helix 3	AA3	A	40	45	Right-handed alpha
Helix 4	AA4	A	46	61	Right-handed alpha
Helix 5	AA5	A	62	78	Right-handed alpha
Helix 6	AA6	A	82	94	Right-handed alpha
Helix 7	AA7	A	97	111	Right-handed alpha
Helix 8	AA8	A	115	120	Right-handed alpha
Helix 9	AA9	A	132	156	Right-handed alpha
Helix 10	AB1	A	159	179	Right-handed alpha
Helix 11	AB2	A	183	199	Right-handed alpha
Helix 12	AB3	A	199	204	Right-handed alpha
Helix 13	AB4	A	204	214	Right-handed alpha
Helix 14	AB5	A	217	233	Right-handed alpha
Helix 15	AB6	A	234	237	Right-handed 310
Helix 16	AB7	A	242	261	Right-handed alpha
Helix 17	AB8	A	280	290	Right-handed alpha
Helix 18	AB9	A	295	316	Right-handed alpha
Helix 19	AC1	A	319	328	Right-handed alpha
Helix 20	AC2	A	333	344	Right-handed alpha
Helix 21	AC3	A	353	371	Right-handed alpha
Helix 22	AC4	A	374	382	Right-handed alpha
Helix 23	AC5	A	394	404	Right-handed alpha
Helix 24	AC6	A	404	414	Right-handed alpha
Helix 25	AC7	A	414	419	Right-handed alpha
Helix 26	AC8	A	420	425	Right-handed alpha
Helix 27	AC9	A	426	434	Right-handed alpha
Helix 28	AD1	A	449	464	Right-handed alpha
Helix 29	AD2	d	9	14	Right-handed alpha
Helix 30	AD3	d	69	80	Right-handed alpha
Helix 31	AD4	d	82	88	Right-handed alpha
Helix 32	AD5	d	113	120	Right-handed alpha
Helix 33	AD6	d	120	129	Right-handed alpha
Helix 34	AD7	d	130	144	Right-handed alpha
Helix 35	AD8	d	178	195	Right-handed alpha
Helix 36	AD9	d	203	229	Right-handed alpha
Helix 37	AE1	d	235	240	Right-handed alpha
Helix 38	AE2	d	268	276	Right-handed alpha
Helix 39	AE3	d	276	289	Right-handed alpha
Helix 40	AE4	d	291	305	Right-handed alpha
Helix 41	AE5	d	307	321	Right-handed alpha
Helix 42	AE6	d	360	362	Right-handed 310
Helix 43	AE7	d	363	368	Right-handed alpha
Helix 44	AE8	d	383	391	Right-handed alpha
Helix 45	AE9	d	392	394	Right-handed 310
Helix 46	AF1	d	409	412	Right-handed 310
Helix 47	AF2	d	414	426	Right-handed alpha
Helix 48	AF3	c	2	12	Right-handed alpha
Helix 49	AF4	c	18	23	Right-handed alpha
Helix 50	AF5	c	23	28	Right-handed alpha
Helix 51	AF6	c	29	40	Right-handed alpha
Helix 52	AF7	c	41	44	Right-handed 310
Helix 53	AF8	c	177	194	Right-handed alpha
Helix 54	AF9	c	205	211	Right-handed alpha
Helix 55	AG1	c	212	218	Right-handed alpha
Helix 56	AG2	c	234	238	Right-handed alpha
Helix 57	AG3	c	239	253	Right-handed alpha
Helix 58	AG4	c	258	264	Right-handed alpha
Helix 59	AG5	c	264	277	Right-handed alpha
Helix 60	AG6	c	282	298	Right-handed alpha
Helix 61	AG7	c	299	306	Right-handed alpha
Helix 62	AG8	c	309	314	Right-handed 310
Helix 63	AG9	c	315	326	Right-handed alpha
Helix 64	AH1	c	326	332	Right-handed alpha
Helix 65	AH2	c	337	339	Right-handed 310
Helix 66	AH3	c	345	349	Right-handed 310
Helix 67	AH4	c	350	366	Right-handed alpha
Helix 68	AH5	c	371	380	Right-handed alpha
Helix 69	AH6	c	386	395	Right-handed alpha
Helix 70	AH7	c	428	430	Right-handed 310
Helix 71	AH8	c	431	436	Right-handed alpha
Helix 72	AH9	c	438	442	Right-handed 310
Helix 73	AI1	D	7	13	Right-handed alpha
Helix 74	AI2	D	15	34	Right-handed alpha
Helix 75	AI3	D	68	78	Right-handed alpha
Helix 76	AI4	D	78	85	Right-handed alpha
Helix 77	AI5	D	100	113	Right-handed alpha
Helix 78	AI6	D	116	141	Right-handed alpha
Helix 79	AI7	D	146	157	Right-handed alpha
Helix 80	AI8	D	157	165	Right-handed alpha
Helix 81	AI9	D	175	197	Right-handed alpha
Helix 82	AJ1	D	201	208	Right-handed alpha
Helix 83	AJ2	D	212	221	Right-handed alpha
Helix 84	AJ3	D	247	284	Right-handed alpha
Helix 85	AJ4	D	308	315	Right-handed alpha
Helix 86	AJ5	D	346	350	Right-handed 310
Helix 87	AJ6	D	357	362	Right-handed alpha
Helix 88	AJ7	D	364	369	Right-handed alpha
Helix 89	AJ8	D	372	395	Right-handed alpha
Helix 90	AJ9	D	406	412	Right-handed alpha
Helix 91	AK1	D	470	476	Right-handed alpha
Helix 92	AK2	D	476	481	Right-handed alpha
Helix 93	AK3	D	513	525	Right-handed alpha
Helix 94	AK4	D	526	532	Right-handed alpha
Helix 95	AK5	D	533	549	Right-handed alpha
Helix 96	AK6	D	553	564	Right-handed alpha
Helix 97	AK7	D	571	577	Right-handed 310
Helix 98	AK8	D	587	594	Right-handed alpha
Helix 99	AK9	D	597	603	Right-handed alpha
Helix 100	AL1	D	606	613	Right-handed alpha
Helix 101	AL2	D	617	621	Right-handed 310
Helix 102	AL3	D	625	631	Right-handed 310
Helix 103	AL4	C	1	7	Right-handed 310
Helix 104	AL5	C	20	25	Right-handed 310
Helix 105	AL6	C	32	46	Right-handed alpha
Helix 106	AL7	C	61	69	Right-handed alpha
Helix 107	AL8	C	126	132	Right-handed alpha
Helix 108	AL9	C	182	188	Right-handed alpha
Helix 109	AM1	C	241	246	Right-handed alpha
Helix 110	AM2	C	275	282	Right-handed alpha
Helix 111	AM3	C	285	311	Right-handed alpha
Helix 112	AM4	C	318	333	Right-handed alpha
Helix 113	AM5	C	413	435	Right-handed alpha
Helix 114	AM6	C	437	453	Right-handed alpha
Helix 115	AM7	C	453	467	Right-handed alpha
Helix 116	AM8	C	468	483	Right-handed alpha
Helix 117	AM9	C	496	507	Right-handed alpha
Helix 118	AN1	C	575	583	Right-handed alpha
Helix 119	AN2	C	587	599	Right-handed alpha
Helix 120	AN3	C	601	614	Right-handed alpha
Helix 121	AN4	C	629	643	Right-handed alpha

There are 30 sheets in PDB entry 7S01. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	11	first strand
Strand 2	A	16	19	anti-parallel
Strand 3	A	35	36	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	270	first strand
Strand 2	d	172	177	parallel
Strand 3	d	163	166	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	292	first strand
Strand 2	C	548	549	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	384	first strand
Strand 2	A	438	439	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	3	7	first strand
Strand 2	C	644	648	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	26	27	first strand
Strand 2	d	30	31	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	58	61	first strand
Strand 2	d	152	155	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	67	68	first strand
Strand 2	d	149	150	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	244	246	first strand
Strand 2	C	572	574	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	541	543	first strand
Strand 2	d	249	256	anti-parallel
Strand 3	d	376	380	anti-parallel
Strand 4	d	326	330	anti-parallel
Strand 5	d	340	348	anti-parallel
Strand 6	d	264	267	parallel
Strand 7	d	356	359	anti-parallel
Strand 8	d	249	256	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	400	401	first strand
Strand 2	d	406	407	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	47	54	first strand
Strand 2	c	77	88	anti-parallel
Strand 3	c	91	102	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	69	71	first strand
Strand 2	C	337	339	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	110	112	first strand
Strand 2	c	115	118	anti-parallel
Strand 3	c	399	400	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	341	344	first strand
Strand 2	c	121	125	anti-parallel
Strand 3	c	415	417	parallel
Strand 4	c	458	460	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	129	131	first strand
Strand 2	c	134	137	anti-parallel
Strand 3	c	144	154	anti-parallel
Strand 4	c	160	168	anti-parallel
Strand 5	c	175	176	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	200	204	first strand
Strand 2	c	228	233	anti-parallel
Strand 3	c	219	222	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	6	first strand
Strand 2	D	54	59	parallel
Strand 3	D	62	67	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	303	305	first strand
Strand 2	D	341	343	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	319	321	first strand
Strand 2	D	327	329	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	416	first strand
Strand 2	D	419	422	anti-parallel
Strand 3	D	503	504	anti-parallel
Strand 4	D	457	469	anti-parallel
Strand 5	D	445	454	anti-parallel
Strand 6	D	436	438	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	416	first strand
Strand 2	D	419	422	anti-parallel
Strand 3	D	503	504	anti-parallel
Strand 4	D	457	469	anti-parallel
Strand 5	D	445	454	anti-parallel
Strand 6	D	428	432	anti-parallel
Strand 7	D	488	492	anti-parallel
Strand 8	D	482	483	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	565	567	first strand
Strand 2	D	583	585	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	58	first strand
Strand 2	C	486	487	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	75	first strand
Strand 2	C	143	147	anti-parallel
Strand 3	C	120	125	anti-parallel
Strand 4	C	113	117	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	110	first strand
Strand 2	C	93	99	anti-parallel
Strand 3	C	80	87	anti-parallel
Strand 4	C	137	138	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	366	367	first strand
Strand 2	C	524	531	anti-parallel
Strand 3	C	160	166	anti-parallel
Strand 4	C	400	402	parallel
Strand 5	C	177	181	anti-parallel
Strand 6	C	375	380	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	190	200	first strand
Strand 2	C	348	358	anti-parallel
Strand 3	C	264	272	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	206	first strand
Strand 2	C	230	236	anti-parallel
Strand 3	C	257	260	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	216	217	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7S01

Analysis of interatomic Contacts of Structural Units in PDB entry:
7S01