Analysis of interatomic Contacts of Structural Units in PDB entry:
7S04


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S04 entry

There is 1 chain in PDB entry 7S04 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 10GLY 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 7S04. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 33Right-handed alpha
Helix 2
AA2
A
47 59Right-handed alpha
Helix 3
AA3
A
66 68Right-handed 310
Helix 4
AA4
A
69 80Right-handed alpha
Helix 5
AA5
A
90 99Right-handed alpha
Helix 6
AA6
A
112 114Right-handed 310
Helix 7
AA7
A
115 125Right-handed alpha
Helix 8
AA8
A
133 151Right-handed alpha
Helix 9
AA9
A
159 169Right-handed alpha
Helix 10
AB1
A
172 176Right-handed 310
Helix 11
AB2
A
202 208Right-handed alpha
Helix 12
AB3
A
210 216Right-handed alpha
Helix 13
AB4
A
223 232Right-handed alpha
Helix 14
AB5
A
233 247Right-handed alpha
Helix 15
AB6
A
250 252Right-handed 310
Helix 16
AB7
A
284 294Right-handed alpha
Helix 17
AB8
A
324 336Right-handed alpha
Helix 18
AB9
A
338 356Right-handed alpha
Helix 19
AC1
A
362 375Right-handed alpha
Helix 20
AC2
A
382 403Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7S04. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
62 65parallel
Strand 3
A
37 43parallel
Strand 4
A
11 16parallel
Strand 5
A
105 108parallel
Strand 6
A
128 131parallel
Strand 7
A
154 157parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 258first strand
Strand 2
A
186 193parallel
Strand 3
A
264 270anti-parallel
Strand 4
A
275 279anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il