Analysis of interatomic Contacts of Structural Units in PDB entry:
7S06

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7S06 entry

There are 2 chains in PDB entry 7S06 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 49	TYR 1204
B	TYR 49	TYR 1204

There are 44 helices in PDB entry 7S06. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	56	Right-handed alpha
Helix 2	AA2	A	65	70	Right-handed alpha
Helix 3	AA3	A	85	111	Right-handed alpha
Helix 4	AA4	A	327	340	Right-handed alpha
Helix 5	AA5	A	370	374	Right-handed alpha
Helix 6	AA6	A	376	380	Right-handed 310
Helix 7	AA7	A	384	390	Right-handed alpha
Helix 8	AA8	A	416	419	Right-handed 310
Helix 9	AA9	A	904	913	Right-handed alpha
Helix 10	AB1	A	919	923	Right-handed 310
Helix 11	AB2	A	931	947	Right-handed alpha
Helix 12	AB3	A	963	973	Right-handed alpha
Helix 13	AB4	A	973	983	Right-handed alpha
Helix 14	AB5	A	994	1004	Right-handed alpha
Helix 15	AB6	A	1009	1018	Right-handed alpha
Helix 16	AB7	A	1026	1038	Right-handed alpha
Helix 17	AB8	A	1043	1061	Right-handed alpha
Helix 18	AB9	A	1087	1094	Right-handed alpha
Helix 19	AC1	A	1094	1105	Right-handed alpha
Helix 20	AC2	A	1129	1143	Right-handed alpha
Helix 21	AC3	A	1161	1176	Right-handed alpha
Helix 22	AC4	A	1194	1204	Right-handed alpha
Helix 23	AC5	B	50	56	Right-handed alpha
Helix 24	AC6	B	65	70	Right-handed alpha
Helix 25	AC7	B	85	111	Right-handed alpha
Helix 26	AC8	B	327	340	Right-handed alpha
Helix 27	AC9	B	370	374	Right-handed alpha
Helix 28	AD1	B	376	380	Right-handed 310
Helix 29	AD2	B	384	390	Right-handed alpha
Helix 30	AD3	B	416	419	Right-handed 310
Helix 31	AD4	B	904	913	Right-handed alpha
Helix 32	AD5	B	919	923	Right-handed 310
Helix 33	AD6	B	931	947	Right-handed alpha
Helix 34	AD7	B	963	973	Right-handed alpha
Helix 35	AD8	B	973	983	Right-handed alpha
Helix 36	AD9	B	994	1004	Right-handed alpha
Helix 37	AE1	B	1009	1018	Right-handed alpha
Helix 38	AE2	B	1026	1038	Right-handed alpha
Helix 39	AE3	B	1043	1061	Right-handed alpha
Helix 40	AE4	B	1087	1094	Right-handed alpha
Helix 41	AE5	B	1094	1105	Right-handed alpha
Helix 42	AE6	B	1129	1143	Right-handed alpha
Helix 43	AE7	B	1161	1176	Right-handed alpha
Helix 44	AE8	B	1194	1204	Right-handed alpha

There are 10 sheets in PDB entry 7S06. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	369	first strand
Strand 2	A	346	350	parallel
Strand 3	A	75	80	parallel
Strand 4	A	401	405	parallel
Strand 5	A	959	962	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	411	first strand
Strand 2	A	1147	1151	anti-parallel
Strand 3	A	1121	1125	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	421	422	first strand
Strand 2	A	426	434	anti-parallel
Strand 3	A	952	954	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	421	422	first strand
Strand 2	A	426	434	anti-parallel
Strand 3	A	1113	1116	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1005	1006	first strand
Strand 2	A	1108	1109	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	365	369	first strand
Strand 2	B	346	350	parallel
Strand 3	B	75	80	parallel
Strand 4	B	401	405	parallel
Strand 5	B	959	962	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	409	411	first strand
Strand 2	B	1147	1151	anti-parallel
Strand 3	B	1121	1125	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	421	422	first strand
Strand 2	B	426	434	anti-parallel
Strand 3	B	952	954	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	421	422	first strand
Strand 2	B	426	434	anti-parallel
Strand 3	B	1113	1116	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1005	1006	first strand
Strand 2	B	1108	1109	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7S06

Analysis of interatomic Contacts of Structural Units in PDB entry:
7S06