Analysis of interatomic Contacts of Structural Units in PDB entry:
7S0T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7S0T entry

There are 7 chains in PDB entry 7S0T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 20	ASN 1502
D	ASN 2	LEU 219
E	ASN 2	LEU 219
F	ASP -2	ILE 487
G	MET 1	VAL 117
P	C 106	C 115
T	A 1	G 14

There are 69 helices in PDB entry 7S0T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	95	116	Right-handed alpha
Helix 2	AA2	A	165	167	Right-handed 310
Helix 3	AA3	A	168	178	Right-handed alpha
Helix 4	AA4	A	194	203	Right-handed alpha
Helix 5	AA5	A	228	233	Right-handed alpha
Helix 6	AA6	A	235	246	Right-handed alpha
Helix 7	AA7	A	285	289	Right-handed 310
Helix 8	AA8	A	306	320	Right-handed alpha
Helix 9	AA9	A	345	360	Right-handed alpha
Helix 10	AB1	A	369	373	Right-handed 310
Helix 11	AB2	A	385	390	Right-handed alpha
Helix 12	AB3	A	531	540	Right-handed alpha
Helix 13	AB4	A	554	558	Right-handed 310
Helix 14	AB5	A	612	622	Right-handed alpha
Helix 15	AB6	A	725	735	Right-handed alpha
Helix 16	AB7	A	744	760	Right-handed alpha
Helix 17	AB8	A	772	784	Right-handed alpha
Helix 18	AB9	A	788	794	Right-handed alpha
Helix 19	AC1	A	806	812	Right-handed alpha
Helix 20	AC2	A	826	834	Right-handed alpha
Helix 21	AC3	A	840	849	Right-handed alpha
Helix 22	AC4	A	857	866	Right-handed alpha
Helix 23	AC5	A	870	895	Right-handed alpha
Helix 24	AC6	A	896	909	Right-handed alpha
Helix 25	AC7	A	911	917	Right-handed alpha
Helix 26	AC8	A	919	934	Right-handed alpha
Helix 27	AC9	A	943	949	Right-handed alpha
Helix 28	AD1	A	978	988	Right-handed alpha
Helix 29	AD2	A	1018	1023	Right-handed alpha
Helix 30	AD3	A	1044	1064	Right-handed alpha
Helix 31	AD4	A	1073	1095	Right-handed alpha
Helix 32	AD5	A	1106	1131	Right-handed alpha
Helix 33	AD6	A	1154	1156	Right-handed 310
Helix 34	AD7	A	1157	1171	Right-handed alpha
Helix 35	AD8	A	1224	1242	Right-handed alpha
Helix 36	AD9	A	1243	1261	Right-handed alpha
Helix 37	AE1	A	1286	1297	Right-handed alpha
Helix 38	AE2	A	1329	1330	Right-handed 310
Helix 39	AE3	A	1332	1334	Right-handed 310
Helix 40	AE4	A	1342	1360	Right-handed alpha
Helix 41	AE5	A	1365	1373	Right-handed alpha
Helix 42	AE6	A	1423	1455	Right-handed alpha
Helix 43	AE7	A	1461	1466	Right-handed alpha
Helix 44	AE8	A	1473	1487	Right-handed alpha
Helix 45	AE9	A	1489	1502	Right-handed alpha
Helix 46	AF1	D	3	24	Right-handed alpha
Helix 47	AF2	D	51	68	Right-handed alpha
Helix 48	AF3	D	109	130	Right-handed alpha
Helix 49	AF4	E	4	24	Right-handed alpha
Helix 50	AF5	E	28	30	Right-handed 310
Helix 51	AF6	E	51	68	Right-handed alpha
Helix 52	AF7	E	109	130	Right-handed alpha
Helix 53	AF8	E	164	175	Right-handed alpha
Helix 54	AF9	F	0	10	Right-handed alpha
Helix 55	AG1	F	52	76	Right-handed alpha
Helix 56	AG2	F	92	96	Right-handed 310
Helix 57	AG3	F	115	124	Right-handed alpha
Helix 58	AG4	F	132	138	Right-handed alpha
Helix 59	AG5	F	227	241	Right-handed alpha
Helix 60	AG6	F	247	252	Right-handed alpha
Helix 61	AG7	F	272	291	Right-handed alpha
Helix 62	AG8	F	321	325	Right-handed 310
Helix 63	AG9	F	357	365	Right-handed alpha
Helix 64	AH1	F	391	406	Right-handed alpha
Helix 65	AH2	F	411	416	Right-handed alpha
Helix 66	AH3	G	3	15	Right-handed alpha
Helix 67	AH4	G	22	30	Right-handed alpha
Helix 68	AH5	G	32	45	Right-handed alpha
Helix 69	AH6	G	76	80	Right-handed 310

There are 19 sheets in PDB entry 7S0T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	35	first strand
Strand 2	A	56	64	anti-parallel
Strand 3	A	70	75	anti-parallel
Strand 4	A	267	270	parallel
Strand 5	A	217	218	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	81	85	anti-parallel
Strand 3	A	156	163	anti-parallel
Strand 4	A	137	147	anti-parallel
Strand 5	A	937	938	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	522	first strand
Strand 2	D	139	147	anti-parallel
Strand 3	D	72	81	anti-parallel
Strand 4	D	87	94	anti-parallel
Strand 5	D	214	218	anti-parallel
Strand 6	D	198	202	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	581	582	first strand
Strand 2	D	37	38	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	177	180	first strand
Strand 2	A	602	606	anti-parallel
Strand 3	E	139	147	anti-parallel
Strand 4	E	72	81	anti-parallel
Strand 5	E	87	94	anti-parallel
Strand 6	E	213	218	anti-parallel
Strand 7	E	198	199	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	739	742	first strand
Strand 2	A	712	717	parallel
Strand 3	A	696	698	anti-parallel
Strand 4	A	669	672	anti-parallel
Strand 5	A	763	766	parallel
Strand 6	A	822	825	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	965	967	first strand
Strand 2	A	1184	1192	anti-parallel
Strand 3	A	971	976	anti-parallel
Strand 4	A	1179	1180	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1137	1141	first strand
Strand 2	A	1145	1149	anti-parallel
Strand 3	A	971	976	anti-parallel
Strand 4	A	1184	1192	anti-parallel
Strand 5	A	1195	1200	anti-parallel
Strand 6	A	1210	1214	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	994	997	first strand
Strand 2	A	1034	1037	anti-parallel
Strand 3	A	1027	1029	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1270	1274	first strand
Strand 2	A	1308	1312	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	33	first strand
Strand 2	D	48	49	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	37	first strand
Strand 2	E	41	49	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	23	24	first strand
Strand 2	G	109	110	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	88	89	first strand
Strand 2	F	102	103	parallel
Strand 3	F	176	177	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	147	149	first strand
Strand 2	F	106	109	anti-parallel
Strand 3	F	172	173	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	113	114	first strand
Strand 2	F	366	367	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	156	158	first strand
Strand 2	F	184	186	parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	336	338	first strand
Strand 2	F	295	298	parallel
Strand 3	F	254	259	parallel
Strand 4	F	213	217	parallel
Strand 5	F	469	474	anti-parallel
Strand 6	F	480	485	anti-parallel
Strand 7	G	64	67	parallel
Strand 8	G	53	60	anti-parallel
Strand 9	G	82	89	anti-parallel
Strand 10	G	20	21	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	343	347	first strand
Strand 2	F	350	355	anti-parallel
Strand 3	F	435	441	parallel
Strand 4	F	454	462	parallel
Strand 5	F	445	451	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7S0T

Analysis of interatomic Contacts of Structural Units in PDB entry:
7S0T