Analysis of interatomic Contacts of Structural Units in PDB entry:
7S14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S14 entry

There are 4 chains in PDB entry 7S14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLY 220
B
 SER -2GLY 220
C
 MSE 1GLY 220
D
 ASN -1VAL 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 7S14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
29 42Right-handed alpha
Helix 3
AA3
A
45 49Right-handed 310
Helix 4
AA4
A
59 67Right-handed alpha
Helix 5
AA5
A
68 74Right-handed 310
Helix 6
AA6
A
75 80Right-handed alpha
Helix 7
AA7
A
96 107Right-handed alpha
Helix 8
AA8
A
109 126Right-handed alpha
Helix 9
AA9
A
133 159Right-handed alpha
Helix 10
AB1
A
170 180Right-handed alpha
Helix 11
AB2
A
211 215Right-handed alpha
Helix 12
AB3
B
5 15Right-handed alpha
Helix 13
AB4
B
29 42Right-handed alpha
Helix 14
AB5
B
45 49Right-handed 310
Helix 15
AB6
B
59 67Right-handed alpha
Helix 16
AB7
B
68 74Right-handed 310
Helix 17
AB8
B
75 80Right-handed alpha
Helix 18
AB9
B
96 107Right-handed alpha
Helix 19
AC1
B
109 126Right-handed alpha
Helix 20
AC2
B
129 132Right-handed 310
Helix 21
AC3
B
133 159Right-handed alpha
Helix 22
AC4
B
170 181Right-handed alpha
Helix 23
AC5
B
211 215Right-handed alpha
Helix 24
AC6
C
5 16Right-handed alpha
Helix 25
AC7
C
29 42Right-handed alpha
Helix 26
AC8
C
45 49Right-handed 310
Helix 27
AC9
C
59 67Right-handed alpha
Helix 28
AD1
C
68 74Right-handed 310
Helix 29
AD2
C
75 80Right-handed alpha
Helix 30
AD3
C
96 106Right-handed alpha
Helix 31
AD4
C
109 126Right-handed alpha
Helix 32
AD5
C
129 132Right-handed 310
Helix 33
AD6
C
133 159Right-handed alpha
Helix 34
AD7
C
170 181Right-handed alpha
Helix 35
AD8
C
211 215Right-handed alpha
Helix 36
AD9
D
5 15Right-handed alpha
Helix 37
AE1
D
29 42Right-handed alpha
Helix 38
AE2
D
45 49Right-handed 310
Helix 39
AE3
D
59 67Right-handed alpha
Helix 40
AE4
D
68 74Right-handed 310
Helix 41
AE5
D
75 80Right-handed alpha
Helix 42
AE6
D
96 106Right-handed alpha
Helix 43
AE7
D
109 126Right-handed alpha
Helix 44
AE8
D
129 132Right-handed 310
Helix 45
AE9
D
133 159Right-handed alpha
Helix 46
AF1
D
170 181Right-handed alpha
Helix 47
AF2
D
211 215Right-handed alpha
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There are 4 sheets in PDB entry 7S14. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
189 198anti-parallel
Strand 3
A
82 89anti-parallel
Strand 4
A
52 57anti-parallel
Strand 5
B
216 219parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
B
52 57parallel
Strand 3
B
82 89anti-parallel
Strand 4
B
189 198anti-parallel
Strand 5
B
162 166anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 166first strand
Strand 2
C
189 198anti-parallel
Strand 3
C
82 89anti-parallel
Strand 4
C
52 57anti-parallel
Strand 5
D
216 219parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 219first strand
Strand 2
D
52 57parallel
Strand 3
D
82 89anti-parallel
Strand 4
D
189 198anti-parallel
Strand 5
D
162 166anti-parallel
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