Analysis of interatomic Contacts of Structural Units in PDB entry:
7S3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S3V entry

There are 6 chains in PDB entry 7S3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6GLU 44
A
 PHE 46TYR 275
A
 TYR 277SER 460
B
 LEU 6GLU 44
B
 PHE 46TYR 275
B
 TYR 277SER 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 7S3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 21Right-handed alpha
Helix 2
AA2
A
26 36Right-handed alpha
Helix 3
AA3
A
39 46Right-handed 310
Helix 4
AA4
A
50 54Right-handed 310
Helix 5
AA5
A
58 62Right-handed 310
Helix 6
AA6
A
82 97Right-handed alpha
Helix 7
AA7
A
98 103Right-handed 310
Helix 8
AA8
A
108 110Right-handed 310
Helix 9
AA9
A
111 116Right-handed alpha
Helix 10
AB1
A
117 119Right-handed 310
Helix 11
AB2
A
120 125Right-handed alpha
Helix 12
AB3
A
127 129Right-handed 310
Helix 13
AB4
A
136 149Right-handed alpha
Helix 14
AB5
A
165 179Right-handed alpha
Helix 15
AB6
A
182 186Right-handed alpha
Helix 16
AB7
A
200 212Right-handed alpha
Helix 17
AB8
A
232 243Right-handed alpha
Helix 18
AB9
A
292 295Right-handed 310
Helix 19
AC1
A
304 308Right-handed 310
Helix 20
AC2
A
309 313Right-handed 310
Helix 21
AC3
A
325 329Right-handed 310
Helix 22
AC4
A
335 352Right-handed alpha
Helix 23
AC5
A
353 376Right-handed alpha
Helix 24
AC6
A
413 420Right-handed alpha
Helix 25
AC7
A
443 459Right-handed alpha
Helix 26
AC8
B
8 21Right-handed alpha
Helix 27
AC9
B
26 36Right-handed alpha
Helix 28
AD1
B
39 46Right-handed 310
Helix 29
AD2
B
50 54Right-handed 310
Helix 30
AD3
B
82 97Right-handed alpha
Helix 31
AD4
B
98 102Right-handed 310
Helix 32
AD5
B
111 116Right-handed alpha
Helix 33
AD6
B
116 125Right-handed alpha
Helix 34
AD7
B
136 149Right-handed alpha
Helix 35
AD8
B
165 179Right-handed alpha
Helix 36
AD9
B
182 186Right-handed alpha
Helix 37
AE1
B
200 212Right-handed alpha
Helix 38
AE2
B
232 243Right-handed alpha
Helix 39
AE3
B
261 266Right-handed alpha
Helix 40
AE4
B
292 295Right-handed 310
Helix 41
AE5
B
304 308Right-handed 310
Helix 42
AE6
B
309 314Right-handed alpha
Helix 43
AE7
B
324 330Right-handed 310
Helix 44
AE8
B
335 352Right-handed alpha
Helix 45
AE9
B
353 376Right-handed alpha
Helix 46
AF1
B
413 420Right-handed alpha
Helix 47
AF2
B
443 459Right-handed alpha
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There are 6 sheets in PDB entry 7S3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
423 424parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
287 290anti-parallel
Strand 3
A
269 272anti-parallel
Strand 4
A
246 250parallel
Strand 5
A
215 221parallel
Strand 6
A
157 161parallel
Strand 7
A
187 190parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 390first strand
Strand 2
A
403 407anti-parallel
Strand 3
A
432 435anti-parallel
Strand 4
A
426 428anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
423 424parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 134first strand
Strand 2
B
286 290anti-parallel
Strand 3
B
269 272anti-parallel
Strand 4
B
246 250parallel
Strand 5
B
215 221parallel
Strand 6
B
157 161parallel
Strand 7
B
187 190parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
388 390first strand
Strand 2
B
403 407anti-parallel
Strand 3
B
432 435anti-parallel
Strand 4
B
426 428anti-parallel
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