Analysis of interatomic Contacts of Structural Units in PDB entry:
7S5V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S5V entry

There is 1 chain in PDB entry 7S5V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ALA 5LYS 1582
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 7S5V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
34 51Right-handed alpha
Helix 2
AA2
E
71 100Right-handed alpha
Helix 3
AA3
E
108 130Right-handed alpha
Helix 4
AA4
E
133 136Right-handed 310
Helix 5
AA5
E
137 157Right-handed alpha
Helix 6
AA6
E
167 192Right-handed alpha
Helix 7
AA7
E
224 230Right-handed alpha
Helix 8
AA8
E
231 233Right-handed 310
Helix 9
AA9
E
234 240Right-handed alpha
Helix 10
AB1
E
259 273Right-handed alpha
Helix 11
AB2
E
285 296Right-handed alpha
Helix 12
AB3
E
296 315Right-handed alpha
Helix 13
AB4
E
316 329Right-handed alpha
Helix 14
AB5
E
356 401Right-handed alpha
Helix 15
AB6
E
414 424Right-handed alpha
Helix 16
AB7
E
424 433Right-handed alpha
Helix 17
AB8
E
435 457Right-handed alpha
Helix 18
AB9
E
459 464Right-handed alpha
Helix 19
AC1
E
465 505Right-handed alpha
Helix 20
AC2
E
506 511Right-handed alpha
Helix 21
AC3
E
515 565Right-handed alpha
Helix 22
AC4
E
573 587Right-handed alpha
Helix 23
AC5
E
590 601Right-handed alpha
Helix 24
AC6
E
605 616Right-handed alpha
Helix 25
AC7
E
719 728Right-handed alpha
Helix 26
AC8
E
785 790Right-handed alpha
Helix 27
AC9
E
795 806Right-handed alpha
Helix 28
AD1
E
808 815Right-handed alpha
Helix 29
AD2
E
817 821Right-handed 310
Helix 30
AD3
E
831 844Right-handed alpha
Helix 31
AD4
E
861 871Right-handed alpha
Helix 32
AD5
E
890 897Right-handed 310
Helix 33
AD6
E
913 920Right-handed alpha
Helix 34
AD7
E
923 930Right-handed alpha
Helix 35
AD8
E
998 1007Right-handed alpha
Helix 36
AD9
E
1009 1018Right-handed alpha
Helix 37
AE1
E
1020 1033Right-handed alpha
Helix 38
AE2
E
1037 1042Right-handed 310
Helix 39
AE3
E
1068 1073Right-handed alpha
Helix 40
AE4
E
1076 1107Right-handed alpha
Helix 41
AE5
E
1109 1116Right-handed alpha
Helix 42
AE6
E
1117 1127Right-handed alpha
Helix 43
AE7
E
1127 1135Right-handed alpha
Helix 44
AE8
E
1135 1155Right-handed alpha
Helix 45
AE9
E
1162 1167Right-handed alpha
Helix 46
AF1
E
1168 1191Right-handed alpha
Helix 47
AF2
E
1196 1210Right-handed alpha
Helix 48
AF3
E
1210 1217Right-handed alpha
Helix 49
AF4
E
1219 1273Right-handed alpha
Helix 50
AF5
E
1278 1295Right-handed alpha
Helix 51
AF6
E
1295 1320Right-handed alpha
Helix 52
AF7
E
1384 1391Right-handed alpha
Helix 53
AF8
E
1414 1419Right-handed alpha
Helix 54
AF9
E
1420 1422Right-handed 310
Helix 55
AG1
E
1436 1441Right-handed alpha
Helix 56
AG2
E
1449 1457Right-handed alpha
Helix 57
AG3
E
1460 1465Right-handed alpha
Helix 58
AG4
E
1476 1480Right-handed 310
Helix 59
AG5
E
1484 1497Right-handed alpha
Helix 60
AG6
E
1508 1511Right-handed 310
Helix 61
AG7
E
1513 1528Right-handed alpha
Helix 62
AG8
E
1562 1568Right-handed alpha
Helix 63
AG9
E
1572 1578Right-handed alpha
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There are 5 sheets in PDB entry 7S5V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
697 700first strand
Strand 2
E
685 688anti-parallel
Strand 3
E
732 733anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
771 773first strand
Strand 2
E
850 853parallel
Strand 3
E
883 887parallel
Strand 4
E
709 713parallel
Strand 5
E
899 904parallel
Strand 6
E
907 912anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1365 1368first strand
Strand 2
E
1346 1351anti-parallel
Strand 3
E
1400 1405anti-parallel
Strand 4
E
1408 1409anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1423 1425first strand
Strand 2
E
1502 1506parallel
Strand 3
E
1532 1536parallel
Strand 4
E
1376 1379parallel
Strand 5
E
1549 1552parallel
Strand 6
E
1557 1561anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1434 1435first strand
Strand 2
E
1474 1475anti-parallel
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