Analysis of interatomic Contacts of Structural Units in PDB entry:
7S5Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7S5Z entry

There are 5 chains in PDB entry 7S5Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 32	ASP 352
B	ARG 32	ASP 352
C	ARG 32	ASP 352
D	ARG 32	ASP 352
E	PRO 3	LYS 1582

There are 93 helices in PDB entry 7S5Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	57	Right-handed alpha
Helix 2	AA2	A	58	65	Right-handed alpha
Helix 3	AA3	A	67	97	Right-handed alpha
Helix 4	AA4	A	116	129	Right-handed alpha
Helix 5	AA5	A	142	173	Right-handed alpha
Helix 6	AA6	A	176	179	Right-handed 310
Helix 7	AA7	A	271	275	Right-handed 310
Helix 8	AA8	A	307	309	Right-handed 310
Helix 9	AA9	A	330	333	Right-handed 310
Helix 10	AB1	A	345	350	Right-handed alpha
Helix 11	AB2	B	52	57	Right-handed alpha
Helix 12	AB3	B	58	65	Right-handed alpha
Helix 13	AB4	B	67	97	Right-handed alpha
Helix 14	AB5	B	116	129	Right-handed alpha
Helix 15	AB6	B	142	173	Right-handed alpha
Helix 16	AB7	B	176	179	Right-handed 310
Helix 17	AB8	B	271	275	Right-handed 310
Helix 18	AB9	B	307	309	Right-handed 310
Helix 19	AC1	B	330	333	Right-handed 310
Helix 20	AC2	B	345	350	Right-handed alpha
Helix 21	AC3	C	52	57	Right-handed alpha
Helix 22	AC4	C	58	65	Right-handed alpha
Helix 23	AC5	C	67	97	Right-handed alpha
Helix 24	AC6	C	116	129	Right-handed alpha
Helix 25	AC7	C	142	173	Right-handed alpha
Helix 26	AC8	C	176	179	Right-handed 310
Helix 27	AC9	C	271	275	Right-handed 310
Helix 28	AD1	C	307	309	Right-handed 310
Helix 29	AD2	C	330	333	Right-handed 310
Helix 30	AD3	C	345	350	Right-handed alpha
Helix 31	AD4	D	52	57	Right-handed alpha
Helix 32	AD5	D	58	65	Right-handed alpha
Helix 33	AD6	D	67	97	Right-handed alpha
Helix 34	AD7	D	116	129	Right-handed alpha
Helix 35	AD8	D	142	173	Right-handed alpha
Helix 36	AD9	D	176	179	Right-handed 310
Helix 37	AE1	D	271	275	Right-handed 310
Helix 38	AE2	D	307	309	Right-handed 310
Helix 39	AE3	D	330	333	Right-handed 310
Helix 40	AE4	D	345	350	Right-handed alpha
Helix 41	AE5	E	13	17	Right-handed 310
Helix 42	AE6	E	25	52	Right-handed alpha
Helix 43	AE7	E	71	97	Right-handed alpha
Helix 44	AE8	E	108	131	Right-handed alpha
Helix 45	AE9	E	137	162	Right-handed alpha
Helix 46	AF1	E	167	193	Right-handed alpha
Helix 47	AF2	E	224	231	Right-handed alpha
Helix 48	AF3	E	233	240	Right-handed alpha
Helix 49	AF4	E	262	275	Right-handed alpha
Helix 50	AF5	E	285	310	Right-handed alpha
Helix 51	AF6	E	316	328	Right-handed alpha
Helix 52	AF7	E	348	355	Right-handed alpha
Helix 53	AF8	E	355	402	Right-handed alpha
Helix 54	AF9	E	404	410	Right-handed alpha
Helix 55	AG1	E	414	435	Right-handed alpha
Helix 56	AG2	E	435	456	Right-handed alpha
Helix 57	AG3	E	459	506	Right-handed alpha
Helix 58	AG4	E	506	513	Right-handed alpha
Helix 59	AG5	E	515	549	Right-handed alpha
Helix 60	AG6	E	550	565	Right-handed alpha
Helix 61	AG7	E	573	589	Right-handed alpha
Helix 62	AG8	E	593	616	Right-handed alpha
Helix 63	AG9	E	719	728	Right-handed alpha
Helix 64	AH1	E	783	790	Right-handed alpha
Helix 65	AH2	E	795	806	Right-handed alpha
Helix 66	AH3	E	808	815	Right-handed alpha
Helix 67	AH4	E	817	821	Right-handed 310
Helix 68	AH5	E	832	845	Right-handed alpha
Helix 69	AH6	E	861	871	Right-handed alpha
Helix 70	AH7	E	890	897	Right-handed 310
Helix 71	AH8	E	913	920	Right-handed alpha
Helix 72	AH9	E	921	933	Right-handed alpha
Helix 73	AI1	E	998	1009	Right-handed alpha
Helix 74	AI2	E	1009	1038	Right-handed alpha
Helix 75	AI3	E	1066	1098	Right-handed alpha
Helix 76	AI4	E	1100	1107	Right-handed alpha
Helix 77	AI5	E	1109	1116	Right-handed alpha
Helix 78	AI6	E	1117	1135	Right-handed alpha
Helix 79	AI7	E	1135	1161	Right-handed alpha
Helix 80	AI8	E	1164	1210	Right-handed alpha
Helix 81	AI9	E	1210	1217	Right-handed alpha
Helix 82	AJ1	E	1219	1273	Right-handed alpha
Helix 83	AJ2	E	1279	1320	Right-handed alpha
Helix 84	AJ3	E	1384	1393	Right-handed alpha
Helix 85	AJ4	E	1414	1421	Right-handed alpha
Helix 86	AJ5	E	1436	1441	Right-handed alpha
Helix 87	AJ6	E	1447	1457	Right-handed alpha
Helix 88	AJ7	E	1460	1467	Right-handed alpha
Helix 89	AJ8	E	1483	1498	Right-handed alpha
Helix 90	AJ9	E	1513	1524	Right-handed alpha
Helix 91	AK1	E	1539	1544	Right-handed alpha
Helix 92	AK2	E	1562	1568	Right-handed alpha
Helix 93	AK3	E	1572	1582	Right-handed alpha

There are 31 sheets in PDB entry 7S5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	195	204	anti-parallel
Strand 3	A	255	260	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	195	204	anti-parallel
Strand 3	A	188	192	anti-parallel
Strand 4	A	310	311	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	211	first strand
Strand 2	A	282	291	anti-parallel
Strand 3	A	215	224	anti-parallel
Strand 4	A	230	238	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	211	first strand
Strand 2	A	282	291	anti-parallel
Strand 3	A	297	305	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	336	338	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	322	first strand
Strand 2	A	325	328	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	49	first strand
Strand 2	E	60	61	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	195	204	anti-parallel
Strand 3	B	255	260	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	195	204	anti-parallel
Strand 3	B	188	192	anti-parallel
Strand 4	B	310	311	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	211	first strand
Strand 2	B	282	291	anti-parallel
Strand 3	B	215	224	anti-parallel
Strand 4	B	230	238	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	211	first strand
Strand 2	B	282	291	anti-parallel
Strand 3	B	297	305	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	336	338	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	322	first strand
Strand 2	B	325	328	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	195	204	anti-parallel
Strand 3	C	255	260	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	195	204	anti-parallel
Strand 3	C	188	192	anti-parallel
Strand 4	C	310	311	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	282	291	anti-parallel
Strand 3	C	215	224	anti-parallel
Strand 4	C	230	238	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	282	291	anti-parallel
Strand 3	C	297	305	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	336	338	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	319	322	first strand
Strand 2	C	325	328	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	195	204	anti-parallel
Strand 3	D	255	260	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	195	204	anti-parallel
Strand 3	D	188	192	anti-parallel
Strand 4	D	310	311	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	282	291	anti-parallel
Strand 3	D	215	224	anti-parallel
Strand 4	D	230	238	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	282	291	anti-parallel
Strand 3	D	297	305	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	336	338	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	319	322	first strand
Strand 2	D	325	328	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	678	680	first strand
Strand 2	E	704	705	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	697	700	first strand
Strand 2	E	683	688	anti-parallel
Strand 3	E	732	737	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	850	853	first strand
Strand 2	E	883	887	parallel
Strand 3	E	709	713	parallel
Strand 4	E	899	904	parallel
Strand 5	E	907	912	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1365	1369	first strand
Strand 2	E	1345	1353	anti-parallel
Strand 3	E	1397	1400	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1424	1425	first strand
Strand 2	E	1502	1505	parallel
Strand 3	E	1532	1536	parallel
Strand 4	E	1376	1379	parallel
Strand 5	E	1549	1553	parallel
Strand 6	E	1556	1561	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1434	1435	first strand
Strand 2	E	1474	1475	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7S5Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
7S5Z